Zingiber officinale (ginger): 121969150
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Entry
121969150 CDS
T08725
Name
(RefSeq) biotin carboxylase 2, chloroplastic-like
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00061
Fatty acid biosynthesis
zof00620
Pyruvate metabolism
zof00640
Propanoate metabolism
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01200
Carbon metabolism
zof01212
Fatty acid metabolism
Module
zof_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
121969150
00640 Propanoate metabolism
121969150
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121969150
Enzymes [BR:
zof01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
121969150
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
121969150
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Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_5
GARS_A
DHQ_synthase
Motif
Other DBs
NCBI-GeneID:
121969150
NCBI-ProteinID:
XP_042375022
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Position
4A:399636..417120
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AA seq
529 aa
AA seq
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MDSIVYCKSPSLPTTGLFPRFAGGIKSSRCISRLGWASNFSSICSPRRNARMTRRSNNHG
GALCATCQAEKILVANRGEIAVRVIRTAHEMGIPCVAVHSTIDQEALHVRLADEAVCIGE
GPSSQSYLVVENVLAAAINRGCTMLHPGYGFLSENANFVDTCKQRGINFIGPNPDSIRVM
GDKATARETMKNAGVPTVPGSEGLLQSTNEAVKLANEIGFPVMIKATAGGGGRGMRLAKE
PEEFVKLLQQAKSEAQVAFGNDGVYLEKYIQNPRHIEFQVLADKYGNVVHFGERDCSIQR
RNQKLLEEAPSPALNPELRKAMGDAAVAAAASIGYVGVGTIEFLLDERGSFYFMEMNTRI
QVEHPVTEMISSTDLIEEQIRVALGERLRYKQEDIVLRGHSIECRINAEDAFKGFRPGPG
KITSYLPSGGPFTRMDSHVYPGYVVPPTYDSLLGKLIVWAPTREKAIERMKRALDDTVIT
GIPTTIDYHKLILEIEDFKKGKVDTAFIPKHEQELAVLQERVLSTAGSN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggactccattgtctactgcaagtctccgagcttgcctactacgggtttgtttcccaga
tttgctgggggaataaaaagctcaagatgtatctccaggctgggatgggcttccaatttc
agcagtatatgttctccaagaagaaatgcccgcatgaccaggagatcaaacaatcacggt
ggagccctttgtgcaacctgtcaggctgagaagattcttgtggctaatagaggagaaatt
gctgtcagagttattcgaactgcacatgaaatgggaataccttgtgttgctgtgcactcc
acaattgaccaggaagctcttcatgtgaggctagcagatgaagctgtatgcattggtgaa
ggtccaagtagtcagtcgtatttggtggttgaaaatgtcctagctgctgccatcaatcgt
ggttgtactatgttacatcctggttatggtttcctgtccgagaatgctaattttgttgac
acctgcaaacaacgcggtatcaactttattggccccaatcctgacagcattcgagtaatg
ggggataaggctacagctagggaaacaatgaagaacgcgggtgttcccacagtacctgga
agcgagggattgctgcagtcaacaaatgaagccgtgaagcttgctaatgaaattggcttt
ccagtcatgatcaaggcaactgcaggtggaggaggacgtggaatgcgtctagctaaagaa
ccagaggagtttgtgaagctactacagcaagccaaaagtgaggcacaagttgcatttgga
aatgatggagtttatttggagaaatatatccagaatccaaggcacattgagtttcaggtt
cttgccgataagtatggaaatgtcgtacattttggagagcgtgattgtagtatccagaga
agaaatcagaagcttctagaggaagctccgtcccctgctttgaacccagaactccggaag
gctatgggtgatgcagcggtggcagctgctgcatctataggttatgtaggtgttggcact
attgagtttctccttgatgaacgaggctctttctactttatggagatgaacaccaggata
caggtagagcatcctgtcacagaaatgatttcttcaactgacttgattgaggagcagatt
cgtgtagctcttggagagaggctgagatacaaacaggaagatattgttctaagaggacat
tcaattgaatgccgcattaatgcggaagatgccttcaaaggttttcgtcccgggcctggt
aagatcacatcatacttgccatctggaggtccatttactagaatggatagtcatgtttac
ccaggctacgtggtgcccccaacttatgattccctacttggaaagcttattgtttgggca
ccaaccagggagaaagcaattgaaagaatgaaaagggccctggatgacactgttatcaca
ggaattcccacaactattgactatcataagctaattcttgaaattgaggacttcaaaaaa
ggaaaagtggacactgcattcataccaaagcatgagcaggaactggctgtactccaggaa
cgggtcctatctaccgcaggcagcaactaa
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