Zingiber officinale (ginger): 121969238
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Entry
121969238 CDS
T08725
Name
(RefSeq) dynamin-related protein 3A-like
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121969238
03029 Mitochondrial biogenesis [BR:
zof03029
]
121969238
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121969238
Enzymes [BR:
zof01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
121969238
Membrane trafficking [BR:
zof04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
121969238
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
121969238
RhoA-dependent endocytosis
121969238
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
121969238
Retention of mitochondria
121969238
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121969238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
AAA_16
Motif
Other DBs
NCBI-GeneID:
121969238
NCBI-ProteinID:
XP_042375153
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Position
4A:2317720..2335671
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AA seq
797 aa
AA seq
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MAEDGLPAGDASKAVAVAPVGHGLIPIMNRLQDIFAHLGSSFSINLPQVAVVGSQSSGKS
SVLEALVGRDFLPRGTDICTRRPLVLQLVRLESSSASAVEGREEWGEFLHLPGKRFYDFS
EIRREIQAETDREAGMRKSISDKQIRLKIFSPNVLNIALVDLPGITKVPVGDQPSDIETR
IRTMIMSYIKYETCIILAVSPANADLANSDALQIARNADPDGSRTIGVITKLDIMDRGTD
ARNFLLGNVIPLRLGYIGVVNRSQEDINVNRSIRDALASEEAFFRNHPAYHGLSHCCGVT
QLAKKLNWILEQHIMAVLPTLKSHINTQLVAVAKEHATYGEFEESKAGKGVKILNTLAKF
CEVFSSMVDGKNELSTDELSGGARIHYILQSIFVKCLEEVDPCEDITDEDIRLAIQNASG
PRTALFVPEAPFEVLVRRQISRLLDPGLQCAKFVYDELIKISYRCLTSELHRYPVLRKRM
DEEITSFLREGLQPAEIMISHIIGMEMDYINTSHPNFIGGSKAVESAQQQVKSSRLVPSL
PKPKDTADSDKFLAAEKVTKSRGIFARSVANGAVPDHLQSVRPVADSDRPGSSGNTSGSI
WAISSIFGASEDRTSAKESTINKSYDAPLQTWEHSFSMIQLREPPLTLKPSESPTEQEAL
EIAITKLLLKSYFDIVRKNVEDSVPKAIMHFLVNHTKRELHNVLIRKLYRENMFDEMLKE
PDGVAAERKRLREKLKALQQARKTLEELPLEAETAKAYTADHDPTELPKTRVIPSSFYSA
NNYLGSLHTATPPNPRF
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggatggcctcccggctggggatgcatcgaaggccgtagcagtcgcgccggta
gggcacggcctgatcccgattatgaataggctccaggacattttcgctcatctggggagc
tccttcagcataaatctcccacaggtggcggtggtcgggagccagagcagtgggaagtcc
agcgtgctcgaggccctcgtcggtcgggatttcctaccgcggggcaccgacatctgcacc
cggcggcctctggtcctgcagttggtgcgcctggagtcatcttcggcctctgcggttgag
ggaagggaggagtggggggagtttctccacttgccaggcaagcggttctatgatttctcg
gagatccgtcgtgaaatccaggcagaaactgatagagaagccggaatgagaaagtctatt
tctgataaacagattcgtttgaagattttctctcccaatgttttgaatatcgctcttgtc
gatttgcctggaattactaaagtgccagtaggtgatcaaccaagtgacattgaaactaga
attagaacaatgataatgtcatatatcaaatatgagacttgtattatactagctgtatca
ccagcaaatgcagatttggcaaattctgatgcacttcaaattgcaagaaatgctgatcca
gatggttctcgcacaattggagtcatcacaaagctggatataatggatagaggtactgat
gcacgcaatttcttacttggcaatgtgattcctctgcgacttggttatattggagttgtc
aatcgtagtcaagaggacatcaatgtcaaccgtagcattagggatgcattggcttctgaa
gaggctttcttccgcaaccatccagcatatcatggcctttctcattgttgcggagttact
cagctggctaagaaattgaattggattttagaacaacatatcatggctgtccttccaaca
ttgaagtctcatataaatactcagttggtagcagttgccaaggagcatgccacatatggt
gaatttgaagaatcaaaggctggaaagggagttaaaatacttaacactcttgccaaattt
tgtgaggttttttcttcaatggtggatggaaaaaatgaactgtcaacagatgaactttct
ggtggagcacgaattcattacattctccagtcaatctttgtgaagtgcctcgaggaggtt
gatccctgtgaggacataactgatgaagatattcgcttggctattcaaaatgcaagtggt
ccaagaactgctttgtttgttccagaggcaccttttgaagttctagtgcgaaggcagata
agccgactgttagatcctggccttcagtgtgcgaagttcgtttatgacgaactaataaag
attagttaccgttgcttaaccagtgagctacaccgttatcctgtcctccgaaagcgcatg
gatgaggagatcactagcttcttacgagaaggccttcaacctgcagaaataatgatatct
cacatcattggaatggagatggattatataaatacttcgcatccaaattttattggtgga
agcaaagcagtggaatctgctcaacagcaagtcaaatcatccaggctagttccatcattg
cccaaacccaaggatacagccgattcagataaatttctagcagccgaaaaagttacaaaa
tcacgaggtatctttgcaagatctgttgcaaatggagctgttcctgatcacttgcagagt
gttcgacctgttgcagactcagatcgaccaggttcttccggaaatacaagtggatcaatc
tgggccatttcatccatttttggtgccagtgaggaccgtacatctgcaaaagaaagtaca
atcaataagtcatatgatgcacccttacaaacttgggagcattcattttctatgatccaa
ctgagagagccaccattaaccttgaagccatcagaaagtccaactgaacaggaggctttg
gagatagctattacaaagttgctcctgaagtcatactttgacattgttaggaaaaatgtt
gaggattcagtgcccaaggccattatgcacttcttggttaatcatactaaacgggaactg
cataatgttttaatcagaaaactttacagggaaaatatgttcgatgagatgctgaaggaa
cctgatggtgttgccgctgaaagaaaacgtcttcgcgaaaaactgaaggccttgcaacag
gcgcgtaagacattggaagagctcccattagaagctgaaactgccaaggcctatactgct
gatcacgatccaactgaactgcccaagacacgcgtaattccttcatctttctattcagct
aacaactatctaggttcgttgcatacagctactcccccaaatccaagattttga
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