Zingiber officinale (ginger): 121969264
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Entry
121969264 CDS
T08725
Name
(RefSeq) ribosome maturation protein SBDS-like
KO
K14574
ribosome maturation protein SDO1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121969264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121969264
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121969264
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GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
121969264
NCBI-ProteinID:
XP_042375191
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Position
4A:complement(2968981..2983565)
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AA seq
355 aa
AA seq
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MSKTLVQPIGQKRLTNVAVVRLKKHGIRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS
NVSKGILAKSKELIAAFGTDDQSKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQK
TINPETHHPYTISMIERLMHEIHFAVDPNQSSKKQALEVIRELQNHFPIKRSPMRLRLVV
PEKRFSTLMEKLSDWNANITSKDESGNEPSIVCELEPGLFRDCDAMMRSLQGRLEILAVS
VHTEGDAHVSQYDTEEFISSSSKELDAVVQLGERLHEQEISAGDSRGQEQAKQIRCNTCD
AALGDTRQYREHFKSDWHKHNLKRKTRQLPPLTAEECLADLELGDSQGDLKEYSF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaccttggtgcagcccatcgggcagaagcgcctcacgaacgtggcagtcgtc
cgcctcaagaagcacggaataaggttcgagatcgcctgctacaagaacaaggtcctttcg
tggcgatcaggagtggagaaggatttggatgaagtgttgcaatcacaaacagtttattca
aatgtctcaaaaggaattcttgcgaagtcaaaagaactgattgcagcatttggtaccgat
gatcagtcaaaaatatgtttggagatcttggaaaaaggagagcttcaagttgctgggaag
gagagagaatctcagttatctagtcagttccgggatattgcaactattgtgatgcagaaa
acgatcaaccctgaaactcatcatccctatacaattagcatgattgagcgacttatgcat
gagattcattttgcagtggatccaaatcaaagctcaaaaaagcaggcattggaagttatt
agggagcttcagaaccatttccctatcaaaagatcccccatgagattgcgtcttgttgta
ccagagaaaaggttttctactcttatggagaaactcagtgattggaatgctaatattact
tcaaaggatgagtctggaaatgagccatctattgtttgcgagttagaacctggccttttt
cgggattgtgatgccatgatgaggagcttgcaagggaggttggaaatacttgctgtatca
gtacacacggaaggggatgctcatgtcagccagtatgatactgaagaatttatttcaagt
tcgtcaaaggagctagacgcagttgttcaactcggcgagaggttgcacgagcaagaaatt
tctgctggggatagtcgcggacaagaacaggccaagcagatcagatgcaacacctgtgat
gctgcactgggagatactaggcaatatagagaacacttcaaatctgactggcacaagcac
aacctaaagcgaaagacaaggcaacttcctcccctaactgcagaagaatgtctagcagac
ttggaactgggagattcacagggcgatctcaaggaatattcattttga
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