Zingiber officinale (ginger): 121969369
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Entry
121969369 CDS
T08725
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
121969369
Enzymes [BR:
zof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
121969369
Glycosyltransferases [BR:
zof01003
]
Polysaccharide
Structural polysaccharide
121969369
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
121969369
NCBI-ProteinID:
XP_042375372
LinkDB
All DBs
Position
4A:complement(5419673..5422811)
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AA seq
517 aa
AA seq
DB search
MEGGALWSQGMCRLQRTAASNCLEERQISPKSEVEASRVQKLKSSMVSRPKIKLWMVRLT
TAVLLWTCVLQLMAIGEIWGPRLLKGWPSCFTPVNESSPVVVVYKAVLPPKRIYRNNGYL
MVSCNGGLNQMRAAICDMVAIARHLNVTLIVPELDKTSFWSDPSEFQDIFDVDHFITSLR
DEVRILKELPLRLKARVDRGLVYSMPPVSWSDISYYENQILPLIQKFKVVHLNRTDARLA
NNGLPLEIQRLRCKVNYASLRFTPQIEELGRRIIRILRQQGPFMVLHLRYEMDMLAFSGC
TQGCTPEEADDLTRMRYAYPWWKEKVIDSDMKRKDGLCPLTPEETTLVLRAFGIDSNFQI
HIAAGEIFGGERRMQALSAAYPKVVKKETLLGPSYLRYFQNHSSQMAALDYLVSLESDIF
VPTYDGNMAKVLEGHRRYLGFKKTILLDRKLLVDLIDQYTNGALSWDEFSSSVKATHAER
MGGPSRRAVIPDRPKEEDYFYANPQECLPQPDKPWTT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggagctctttggtctcaagggatgtgccgcttacagagaacagccgcttct
aattgcttggaggagaggcagattagtccgaagtctgaggtggaagcttcgagggtgcag
aagctgaagagctcgatggtgtcgaggcccaagatcaagctttggatggtgcgattgacg
acggcggtgttgctttggacctgcgtcctccagcttatggcaattggggagatttggggg
ccgaggctattgaaagggtggccatcctgcttcactccggttaatgaatcctctccggtg
gtcgtcgtctacaaagctgttctaccccccaaaagaatctacaggaacaatggatacttg
atggtttcatgcaatggtggacttaatcaaatgagagcagcgatctgcgacatggttgct
attgcgagacatttgaatgtaacactcatagtgccagagttagacaagacctccttctgg
agtgaccctagtgaattccaagatatattcgatgtcgatcattttataacttcattgaga
gatgaagttcggatattgaaggaacttcctctgaggttaaaggcgagggttgatcgagga
ctggtttattcgatgccgcctgttagttggtctgatatttcgtattacgaaaatcagatt
cttcctttgatacaaaagttcaaggttgtccatttgaatagaaccgatgcccgccttgct
aataatggtctgccgctagaaatacagagattgcgctgcaaagtgaactatgcctcactt
agattcacccctcaaattgaagaattgggcagacggataattagaattctgcggcagcaa
ggtccttttatggttctgcatttgcggtatgaaatggatatgttggcattctccgggtgc
acccaaggttgtactcctgaggaagcagatgacttgactagaatgagatatgcatatccc
tggtggaaagagaaggtcatcgactctgatatgaaaaggaaagatggtctctgccctcta
acaccggaagagaccactttggtactaagagcattcggtatcgatagcaattttcaaata
catattgcagctggagaaatatttggcggagaaaggagaatgcaggctctttccgcggct
tatcctaaagtggtaaaaaaggaaactctattggggccttcatatcttcgatactttcag
aatcattcatcccaaatggccgcgttagattacttagtttctttagagagcgatatcttt
gttcctacatatgatggtaacatggctaaagttcttgaaggtcatcgcaggtatctcggg
ttcaagaagacaattctattggacaggaagctgctggtcgatctgatagatcagtacacc
aatggcgccttgagttgggatgaattctcttcgtcagtgaaggcaactcatgctgaacgc
atgggtggccctagccggagagcggtgattcccgacaggcctaaggaagaggactacttc
tatgcaaatccccaagagtgtctcccacagcctgataaaccatggactacgtga
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