Zingiber officinale (ginger): 121969372
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Entry
121969372 CDS
T08725
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121969372
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121969372
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121969372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
Prok-RING_4
RINGv
FANCL_C
zf-C3HC4_4
Prok-RING_1
zf_RING_Vps8
zf-Nse
zf-Vps39_C
zf-RING_4
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
121969372
NCBI-ProteinID:
XP_042375380
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All DBs
Position
4A:5475188..5476734
Genome browser
AA seq
155 aa
AA seq
DB search
MGLSSLPNPSESVLTLVLVNTALTISILKQLLRSLRQLLRLRPPPPSPSDHAAGDQAQEP
HSLTERFRSRCRPVRFGSALGRRREQTADCRVCLARFEPDSVVNRLPCGHFFHKVCLEKW
LDYQHATCPLCRTAVLPGEESGAACFVSTSSWQWF
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atggggctttcgagcctccccaacccatcggagagcgtgctcactctcgtactcgtcaac
actgccctcaccatctccatcctgaagcagctcctccgctccctccgccaactcctccgc
ctccgcccgccgcctccgtcgccgtcggatcacgcagcgggagatcaggcgcaggagccg
cacagcctgacggagcggttccgcagccggtgcaggccggttcggttcggctccgccctc
gggcggaggcgggagcagaccgccgactgccgcgtctgcctcgcccggttcgagccggac
tcggtggtgaaccggctcccttgcggccatttcttccacaaggtctgcttggaaaagtgg
ctcgactaccagcacgccacatgccccctctgtcggactgccgtcctccccggtgaggaa
tccggcgctgcctgcttcgtttcgacttcttcttggcagtggttttag
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