Zingiber officinale (ginger): 121969494
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Entry
121969494 CDS
T08725
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 2-like
KO
K13719
ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121969494
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
121969494
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C88
121969494
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GFIT
Motif
Pfam:
zf-C2H2_OTU1_C
OTU
Motif
Other DBs
NCBI-GeneID:
121969494
NCBI-ProteinID:
XP_042375565
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All DBs
Position
4A:8942761..8948641
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AA seq
208 aa
AA seq
DB search
MEGIIVRRVIPSDNSCLFNAVGYVMEHDRHKAPYLRQVIAAVVGSDPGKYTEAFLGKPND
AYCSWIQDPDKWGGAIELSILSEFYGREIAAYDIQTTRCDVYGQGKNYSERVMLIYDGLH
YDALAMSPYDGAPEEFDQTVFSVRSDRSIGPVENFALNLVKDAQKKRSYTDTAHFTLRCG
VCQAGLVGQKEAVEHAQATGHVNFQEYR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggaagggattattgttcggagagtgatcccttcggataacagctgtctgttcaatgct
gtggggtatgttatggaacatgacagacacaaagctccatatttgagacaggtcatagct
gcagttgtgggaagtgatccaggaaaatacactgaagcctttttgggaaagccaaatgat
gcatattgttcatggattcaagatcctgataaatggggtggtgctatagaattatccatt
ctctctgagttctatggacgtgaaattgcagcttatgatatccaaacaactcggtgtgat
gtgtatggccaggggaagaactacagtgaaagggtgatgctgatatacgatggcctacat
tatgacgcattagctatgtctccatatgatggggcgcccgaagagtttgatcaaactgtt
ttttctgttagaagtgaccgttccattggacctgtggagaactttgcacttaatctggtt
aaagatgcccaaaagaagaggagttacacagacactgcccactttaccttacgctgtgga
gtatgccaagctggtttggttggccaaaaggaagctgttgagcacgctcaagctacgggc
catgtaaatttccaagagtatcggtag
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