Zingiber officinale (ginger): 121969495
Help
Entry
121969495 CDS
T08725
Name
(RefSeq) glutamate receptor 3.5-like isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
121969495
Ion channels [BR:
zof04040
]
Ligand-gated channels
Glutamate (ionotropic)
121969495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-GeneID:
121969495
NCBI-ProteinID:
XP_042375568
LinkDB
All DBs
Position
4A:9054659..9058872
Genome browser
AA seq
968 aa
AA seq
DB search
MKKEIGGIVFLHKNKVTSKVLSPLQSSTLIMESTAMVSLWVLWLLTALVTTGAAEEAAAA
AANGSSRPSVVNVGALFTYNSVIGRAAMLGIQQAVKDVNANPAVLSGTTLNVIPQDTNCS
GFLGTIEALQLMEKNVVTVVGPQSSVIAHVISHVVNELHVPLLAFGATDPGLSPLEYPYF
IRTTHSDYFQMNAVADLVEFYGWREVTAIYVDDDYGRGGVIALGDALATKRSKVSYKAGF
PPKSDLNAIKDLLMRVNLMESRVYVVHANPDSGLNIFSLAKDLGMMGTGYVWITTDWLAS
SLDSFITADPNTMSLIQGTIALRHHTPDSASKKRFISRWNDMIRQGEASSGLNSYGLYAY
DSIWLVAHAVDQFLNEGQTINFSSDPRLHDAKGSRLRLSSLQIFDAGESLLHKLLQTNFT
GLSGRMQFDSDRNLIRPSYDILNVGGTGSRLIGYWTNYSGLSVVAPEILYQKPPNTSPQN
QKLRRVIWPGDTAAIPRGWVFPNNGKPLRIGVPNRASFKQFVTESSNSDNLGGFCIDVFN
AAIKLLPYPVPCSFKLIGDGSKNPNYDEIMNMIARNELDAAVGDFAIVRNRTKIADFTQP
YTESGLVIVTRVRESSTNALAFLKPFSVEMWCVTGAFFILVGTVVWILEHRMNPEFRGKP
RQQIATMFWFSFSTMFFSHRENTVSTLGRLVLIVWLFVVLIINSSYTASLTSILTVQQLS
SGITGLDSLISSTEPIGYQEGKFARNYMIEELNIHESRLVPLNSPEQYATALELGPEGGG
VAAIVDEVPFVEIFLPTYCQFRIIGQEFTKNGWGFAFQRDSPLAVDLSTAILTLSESGEL
QRIHDKWLTRTGCSSSNSDIGANQLSLKSFQGLFLLCGAVCVLALTIFFIKICHQYTRYS
STEVGESKDIEIMRETNARLGRLKSFKGLIQFVDTKEEDIDKAIQRKLSDKQQQSSRTSL
DGCSASHM
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagagataggtggaatcgtttttctacacaaaaataaagtaacaagcaaggtt
ctttccccactgcaatcttctacgcttataatggagtcgacggccatggtttccctgtgg
gtcttgtggttgttgactgcactcgtaacgactggggcagcagaagaggcggcggcggcg
gcggctaacggaagcagcaggccttctgtggtgaatgtcggcgctcttttcacctacaac
tctgttattggaagggcagccatgctcgggatccaacaagccgtcaaggatgtcaacgcc
aatccggccgtcctctcagggactacgttgaatgtcatcccacaagatacgaactgcagt
ggctttcttggcacaatcgaagccttacagctgatggagaaaaacgtggtgactgtcgtt
ggtcctcaatcgtccgtcatagcccatgtcatctctcacgtcgtcaatgaacttcacgtg
ccactgttagctttcggtgctacagatccaggcctttctcccctggaatatccctacttc
attcgaacaactcatagtgattacttccaaatgaatgccgtagctgatctagttgagttc
tacggatggagagaggtgactgccatctacgtcgatgatgattatggaaggggaggagta
atagctctgggcgatgcactagcaacgaagagatctaaggtctcctacaaagcaggtttc
cctcccaaatccgacttgaacgcgatcaaagacctgttgatgagagtcaacttgatggag
tctcgagtatacgttgtccatgccaatcctgactccggcttgaacatcttttcccttgcg
aaagatctggggatgatgggcactggatatgtgtggataaccactgattggctcgcttcc
agtttggattcattcataacagctgatccaaacaccatgagtctgatacaaggaaccatc
gcgcttcgccatcataccccagattctgcctcgaagaagagatttatatctagatggaat
gacatgatccgtcaaggagaagctagttcaggattgaacagttacggtctgtatgcttat
gattcaatttggttggttgcgcatgcagtcgaccaatttctaaacgaaggacagacgatc
aacttctctagtgatcctcgactgcacgacgctaagggcagcaggcttcgcctgtcatcc
ctgcaaattttcgatgcaggcgagagcttactccacaaactgttgcagacaaactttaca
gggctttcgggtcgaatgcaatttgattcggataggaatctcatccggccatcgtatgac
attctgaacgtcggtggaactggatctcggttgataggctactggacaaattactctggt
ctgtcagttgtagctcctgagattttatatcagaagccgccaaacacgtcccctcaaaat
cagaagctacgcagggtcatatggcctggagatacagcagcgattccacgcggttgggtg
tttccaaacaatgggaagcccctgagaattggagtccccaaccgagcgagtttcaaacag
tttgtgacagagtcttccaactcggacaatctcggtggcttttgcatcgatgtattcaat
gctgcaattaagctgttgccctatccagttccatgttcatttaagctaatcggagatggt
tctaagaatccaaactatgatgaaattatgaacatgatagctcggaatgaacttgatgcg
gcggtaggggactttgctatcgtgagaaatagaaccaaaatcgctgattttacgcagccg
tacacggaatcagggcttgtcattgttactcgtgtccgagagagtagcacgaacgctttg
gccttcctgaaaccattttcagtagagatgtggtgtgtcactggagctttctttatcctt
gtgggaacggttgtttggatccttgaacatcggatgaacccagagtttcgtggtaaacct
agacaacaaatagcaaccatgttttggtttagtttctcaaccatgtttttttcccataga
gagaacacagtgagcaccctcggacgacttgtactgattgtgtggctctttgtagtccta
attatcaactcgagctacacagctagcttaacatcgattctcacagttcaacagctctcc
tccgggattacagggctcgacagtttgatctcctctaccgagcctatcggctaccaagag
gggaagtttgcgaggaattatatgatagaagagctcaacattcacgagtccaggcttgtg
ccattgaactcacctgaacagtatgctacggctcttgagcttggacctgaaggtgggggt
gtagcagccatagtagatgaggttccatttgtcgagatcttcctccccacttactgtcag
ttcaggatcatcggccaagagttcaccaaaaatggatggggatttgcattccagagggac
tctcctcttgccgtcgacttatctactgcgattctgacattgtccgagagcggggaacta
cagagaatccacgacaaatggttaacacgcactggctgttcttcctccaacagtgacata
ggggcaaaccagctaagtctcaagagtttccagggtctcttcctactctgtggcgccgtc
tgtgttcttgctctcaccattttcttcataaagatatgccatcaatataccaggtacagc
agcacagaagtcggcgagtctaaagacattgagattatgcgtgaaaccaatgctcgcctt
ggtaggttaaaaagtttcaagggcctaattcaatttgttgatacaaaggaagaagatatt
gataaagcgattcagaggaaactaagtgacaaacagcaacaaagttctcgtacttcactt
gatgggtgttcggcgtcacatatgtag
DBGET
integrated database retrieval system
