Zingiber officinale (ginger): 121969633
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Entry
121969633 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
121969633
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121969633
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121969633
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121969633
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121969633
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Peptidase_C12
Motif
Other DBs
NCBI-GeneID:
121969633
NCBI-ProteinID:
XP_042375763
LinkDB
All DBs
Position
4A:16440109..16454064
Genome browser
AA seq
901 aa
AA seq
DB search
MRLYIDLGFSGAALLLVLLVGPVVAFLVHQKWRLAEARQAEVRRLALLAAQEAAVAEMEA
MASYSATSAAGVYSTYVAKEPSALPECAVCSVFAAARCSRCKIVRYCSGKCQIIHWRRGH
KDECRPPPVSDKYNREDELGLEGVQSEQSGLAEKMLEPKEGTGEVERFSQRSAASISSYS
MDNLNGVHNEGISSKDVSVKTIISDSFSAPSIIPANLAFSHTINSPNDAWYDGKSLPNIA
GAGESSSFTSGLGSVADTGNGATIMSSTPELARSNSLANNSMFSDHSREIPSTSKVEADD
LVPSGTSDLKATSSLDHASNEVCVRVGNGFPPSTYSISENYSHESSSSEAISNLESNGTL
VSNKKISRYVANGRSTEVKPINPKTTRSSAATLDHYSTNGVTRSFSLYESSSNGNAHRTS
SKVSRHYYSELMLFPYDLFIKFYNSDKVNLQPCGLTNCGNSCYANAVLQCLVFTRPLTAY
LLEGFHSRICSKQEWCFTCELENLVRNAKEGKSPLSPIGILSHLQNSGSKFGHGQQEDAH
EFLRYAIEVMQSICLKEAVAKADGLLAEETTLIQQTFGGYLQSKLRCARCKGKSEHCERM
MDLTVEIGGDISTLDEALLRFTSSETLDGENKYKCDRCNSYERAKKKLTILEAPNVLTIV
LKRFQSDNFCKINKAIQFPEYLDLARYMSGDDKSPVYRLYAIIVHLNVTNTSSSGHYICY
VKDRQGMWYEIDDSKVKPVDIEKVLSKGAYMLLYSRCLPRAPSSVRKARAHEFVQQARKI
TRDSKGKPGGSLVSDYGEYLYPYRSDLYGHQNDSASDNSSLFDESSTCSTVSTKESTTTE
DLWEHMSGESDCVSPSSPMRISENYDGFTRSRHSSKADVTMPVTDPGQNTSSSGRKLIRW
W
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctctacatcgatctaggtttttcgggagcggcgctgcttctggtcctcctcgtc
gggcccgttgttgcgttcctagtgcatcagaaatggcgtctggcggaggcgaggcaggcg
gaggtccggcggttggcgctgctcgcagcgcaggaggccgccgtcgcggagatggaagcc
atggcatcctactcggccacatcagctgctggtgtttattctacttacgttgctaaggag
ccctcggcgctgccggaatgtgctgtgtgctctgttttcgccgcggcgagatgttcccgt
tgcaagattgtcagatattgctctggtaagtgtcagattattcattggaggcgaggtcac
aaggacgaatgccgacctccacctgttagtgataagtataatagggaagatgaattgggt
cttgaaggagttcaatctgaacagtctggtttagcggagaagatgctagaacccaaagag
ggtactggagaagttgagaggttttctcagcgttctgctgcatctatatcctcttattct
atggataatcttaatggggtccacaatgaaggtattagttctaaggatgtttctgtgaag
acaatcatttctgattcattctctgctccatcaataatacccgctaatttggcattttct
cataccattaattctcctaatgatgcctggtatgatggcaaatcacttccaaatattgct
ggggcaggagaatcttcatcttttactagcggccttggaagtgtagctgacactggcaat
ggagctactataatgtcttcaactcctgaacttgctaggtcaaattctttggctaataac
agtatgttctcggatcattcaagggagattccatctacatctaaagtagaggcggatgat
ttggttcctagtggcacatctgacttaaaagcgacttcatcacttgatcatgcaagcaat
gaagtatgtgtgagggttggtaacgggtttcctccaagtacatactcgatatctgaaaat
tattctcatgaatcctcatcatcagaagctatatctaacttggaaagtaatgggactcta
gtttcaaacaagaaaatctcaagatatgttgctaatggacgaagcactgaagtaaagcct
ataaatcccaaaaccaccagatcctctgcagctactttagatcactattctactaatgga
gttactcggtctttttcactctatgaatcatcctcaaatggcaatgctcatagaacatct
tctaaagtttcaaggcactactattcggagttgatgctttttccatatgaccttttcatc
aaattctacaactctgacaaggttaatttgcagccctgtggtcttactaattgcggaaat
agctgctatgctaatgcagttctccagtgtttggtatttactcggccattgactgcatat
cttctcgaaggttttcattctagaatatgttcaaagcaggaatggtgttttacatgcgaa
cttgaaaaccttgtgaggaatgcaaaggaagggaagtctcctttatctccaattggaatt
ctgtctcatttgcagaacagtggaagtaagtttggtcatggacagcaggaagatgcccat
gaattcttaaggtatgctattgaagtcatgcagtctatttgcttaaaggaagctgtagca
aaagcagatggattattggcagaggagacaacactaatacaacaaacttttggtggctat
ctgcaatccaaattacgatgtgctagatgcaagggcaagtctgaacattgtgaacggatg
atggatcttactgttgagataggtggcgatatttcaactcttgatgaagcactacttcgt
tttacatcatcagaaactttggatggggaaaacaaatataagtgtgacagatgcaactcc
tatgagcgagcaaaaaagaaattgacaatattggaggctcctaatgtcctcaccattgtg
ttgaaaagatttcagtctgataatttttgcaagatcaacaaagctatccagtttcctgaa
tatctcgatttagcacgttatatgagtggcgatgacaaatcccctgtttatcggctttat
gcgataattgttcacttgaatgtcactaacacttcctcttctggtcactacatctgctat
gtgaaggatagacaaggcatgtggtatgagattgatgatagcaaggtaaagcctgtggac
atcgagaaggttttgtcaaaaggtgcatatatgcttctttattccaggtgtttgcctcgt
gctccaagttctgtgaggaaagcgagggctcatgagtttgtacaacaagcaaggaagatc
acaagggacagtaaaggaaagcctggtggctcattagtttctgactatggggaatactta
tatccatatcgatcagatctctatggtcaccagaatgattctgccagtgacaattcttca
ctcttcgatgaaagctccacttgcagtacagtgagcacaaaggagtcgacgaccacagaa
gacttgtgggagcacatgtctggtgaatcagactgtgtcagccccagtagccccatgaga
atctctgagaattatgatggatttactcgctctcggcattcctccaaagcagatgtcacg
atgccagttacagatcctggacaaaatactagttcctcaggaaggaaattgatcagatgg
tggtag
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