Zingiber officinale (ginger): 121969733
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Entry
121969733 CDS
T08725
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
121969733
Enzymes [BR:
zof01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
121969733
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
121969733
Prokaryotic type
121969733
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
121969733
NCBI-ProteinID:
XP_042375891
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All DBs
Position
4A:25186814..25191295
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AA seq
498 aa
AA seq
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MAPAVVAPSSAPAAAVHPARVRFLRPGSPSSSPSGPVVYWMFRDQRAADNWALLHAADLA
SRSAVPLSVAFCLSRRFLGAHARQLGFMLRALRPLSRRLAALGLPFFLLRGDAPDVLPDL
FRRLGASTLVADFSPLRPVRDWKDALCERLPAEVAFHEVDAHNVVPIWVASDKLEYSAKT
IRSRIHRLLPEFLVEFPKLPAPAVPWAGEAPPEIEWDELINEVIEETGEVPEINWCEPGE
EAATEMLMGSKDGFLTKRLKSYDSDRNDPVKPRALSGLSPYLHFGHISAQRCALEARKLR
NSCPKSVDAFLEELIVRRELADNFCYYQPHYDSLQGAWEWARKSLMGHAKDKREHVYSRE
QLEKAQTADPLWNASQLEMVHCGKMHGYMRMYWAKKILEWTNRPEEALSIAIYLNDKYEL
DGRDPNGYVGCMWSICGVHDQGWKERPVFGKIRYMNYAGCKRKFNVEGYIAYVNKLVSGT
KKRKSDSLTSLVTKHLKS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcacccgcagtcgtcgcacccagctccgcaccggccgccgcggtccacccggcccgc
gtccgtttcctcaggcccggctccccatcctcctccccttccggccccgtcgtctactgg
atgtttcgcgaccagcgagccgccgacaactgggccctcctccacgccgctgatctcgcc
tcgcgctccgccgtccccctctccgtcgccttctgcctctcccgccgttttctcggcgcc
cacgcccgccagctcggcttcatgctccgcgctctccgccctctgtctcgccgcctcgca
gccctaggactccccttcttcctcctacgcggcgacgcccccgatgtcctccctgatctc
ttccgccgcctcggagcctccaccctcgtcgccgatttctcacccctgcgccccgtccgc
gattggaaggacgctctctgcgagcgcctcccagctgaagttgccttccacgaggtcgat
gcccacaacgtggtccctatctgggtcgcctccgacaagctcgaatacagcgccaagacg
atccgctccaggatccatcgtctcctcccggagtttctcgtcgagttccccaagcttccg
gcccctgcggtgccgtgggcaggggaggcaccgcctgaaatcgaatgggatgaactgatc
aacgaagtcattgaggaaacaggggaagtgccggagatcaactggtgtgagccgggggag
gaagctgcgacagagatgctgatgggaagcaaagacggcttcttgacaaagaggttgaag
agttacgacagcgatcgtaatgatccagtgaagccgagggcgttgtcggggctctcgcct
tacctgcactttggccatatctcagctcagcggtgtgctcttgaagctcggaagcttcgg
aattcctgtcccaagtcggtggatgcattcttggaggaattgattgtgaggagggagttg
gctgataatttttgctattaccaacctcattatgattcgttgcaaggtgcatgggagtgg
gctcgcaagtccttgatgggtcatgctaaagataaacgagagcatgtttattcgagagaa
cagctagagaaagcacaaactgctgatcctctatggaatgcctcgcaacttgagatggtt
cattgtggtaaaatgcatggatacatgaggatgtactgggccaagaaaatcctcgaatgg
acaaacagaccagaggaagcattgtcaatagcaatatacttaaatgacaagtatgagttg
gacgggagagatccaaatggctatgtcggttgcatgtggtctatatgtggcgtccatgat
cagggctggaaagagaggccggtctttggaaagattcgctacatgaattatgcaggttgc
aaaagaaaatttaacgttgaaggatacatagcctatgtgaataagctggtcagtggaacg
aagaagaggaaatcggatagtttaacaagtcttgtaacaaaacatttgaaatcatag
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