Zingiber officinale (ginger): 121969801
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Entry
121969801 CDS
T08725
Name
(RefSeq) protein transport protein Sec24-like At4g32640 isoform X1
KO
K14007
protein transport protein SEC24
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121969801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121969801
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121969801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
121969801
NCBI-ProteinID:
XP_042375989
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All DBs
Position
4A:34466716..34550081
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AA seq
1136 aa
AA seq
DB search
MESTSPPFALGPPRQRPGMVPNATSVPQTPQIGQPMASSSIPPPFATAFLGSSRPAPTPF
ASRPPPPGAIPQGPIASNGPPNSGFIAPRAFPPPSAQQAPALAASSSIRAPPPSVAPTQG
SGLRQYPGSPPSGASMAAAASPFMGPPASQQFGRPPTSQSPFSGPLAPQLPFAGPPSSQR
PLVGSMNSQLPLAGPATSQLSFGGPLSSQSPFAGPPTSQAPFAGTPTSQPPFTGQPTLQR
PFARSTTPQPPFAGPPTSQQFGGPPTQTFTGPPISQFVSPLTSQPYSSRPSSPSYMATPY
SQPFSKPPTVGTTFASPVWPSQPGQVVPSLPGNVQAPPRMFGVPPGMPSQQIPPVPPAMG
HSALAGPQVSTQSKIDPNQIPRPLPSSSITLFETRQGNQANVPPPATSNFVVKDNGNSSP
RLMRCTLNQIPCTGDLLATSGMPLTLMVQPLALPHQSEEPIQVVDFGESGPIRCSRCKSY
INAFMRFTDHGQKFICNLCGFTNETPRDYYCNLGPDGRRRDADERPELCKGTVEFVATKE
YMVRDPMPAVFFFLIDVSLNAVQTGATAAACSAISQSLADLPDGPRTMVGIATFDCSIHF
YNLRRASQQPLMLIVPDVHDVYTPLHTDVVVPLTECRQSFEQLLESIPSLFENNKVADSA
FGAAVKAGFLALKPTGGKLLVFQSVLPSIGIASLSSREAEGRTNISAGDKEAHKLFQPAD
KTLKTMAIEFAEHQVCVDIFITAQTFVDIASISVVPGTTGGQVYYYYPFSAVSDPGKLYN
DLRWNLSRPQGFEAVMRVRCSQGLQVQEYAGSFCKRIPTDIDLPAIDCDKTIMVTFKYDD
KFQENSECAFQCALLYTTVYGQRRIKVINLSLPCTSMLSNLFRTADLDTQFACILKQAAS
SILVNSLSQVREQIINLCINILHAYRKFCATVSSSGQLILPEALKLLPLYTLALVKSIGL
RNDGRLDDRCYWVSHVMSLSISLAIPLVYPRMISIHDLTEKENDGSLSSSTIPLSSEHIN
DDGIYLLENGEDCLIYVGNMVNPDTLQKLFGVTSVDGLSTQLVLQQFDNDLSEKLSDVIN
EIRQQRCSYLRLRLCRKGDPTGTHFLSYMVEDKTPGGLSYVEFLVHVHRQIQTKMA
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgacctctccgcctttcgccctggggcctcctaggcagcgtccagggatggtg
cccaacgctaccagcgtccctcaaactccccagatcggccaaccgatggcctcctcatcc
atcccgcctccgttcgcgacggctttcctcggctcctcccgcccagcccctacccctttc
gcatcccgcccgcctccaccaggggccatcccacagggaccgatcgccagcaacgggcct
ccaaattccggatttattgctcctcgggccttccctccgccttcagcacagcaggcgccg
gctttggccgcctcgtcatcgatcagggcgccccctccgtctgttgcacctactcaaggt
tcgggcctccggcagtatcctggaagtccaccttccggggcttccatggcagctgccgca
tctccgtttatgggccctccagcatctcaacagtttggaagaccgcctacctcccaatca
cccttctctggtcctctggcaccacagcttccttttgctggaccaccgtcctcacaacgt
cctttggttggatcgatgaactcacaactgccccttgccggaccggctacctcacagttg
tcctttggcggaccgctctcttcgcagtcgccttttgcaggaccacccacttcccaggcg
ccctttgcaggaactccaacttcacaaccgcccttcactggacagcctactttgcagcgg
cccttcgccagatcgaccacccctcagccacccttcgccgggccgcccacctctcagcaa
tttggtggaccacccactcagacatttaccggtccgccaatttcacagtttgtcagtcca
ctaacctcgcagccgtattcatctcggccatcttcaccatcgtatatggccactccatat
tcacagccattttccaagcctccaaccgtgggcactacttttgcttctccagtttggcca
tctcagccaggacaggtggttccttccttgcctggtaatgtgcaagcacctcctaggatg
tttggcgtgccaccaggcatgccaagtcaacaaattcctccagtcccacctgctatgggc
cattcagccctagcagggcctcaggtctccacacagtcaaagatagatccaaaccaaatt
cctcgacctttgccaagttcgtcaatcacactatttgaaactcgtcagggaaatcaagca
aatgtacctccgcctgcaaccagcaattttgttgttaaggataatggaaattccagccct
cgtttgatgaggtgcacactgaatcagattccatgcactggggaccttctagctacctct
ggtatgcctctcaccttaatggtgcaacccttggcacttccacatcaatcggaggagcct
atccaagttgtcgactttggtgaaagtggacctattcggtgttctagatgcaaaagttat
ataaatgctttcatgaggttcactgatcatgggcaaaaatttatttgcaatttatgtggt
tttaccaatgaaactccacgggactactactgtaatcttgggccagatggtaggcgtcgt
gatgcagatgaaaggcctgaactttgcaaaggaacagttgaatttgttgctacgaaagaa
tacatggttcgtgatcccatgcctgctgtcttcttttttctcattgatgtttcactgaat
gctgtacaaactggtgcaactgctgcagcttgcagtgcaatcagtcagtctctggcggat
cttcctgatggtccaaggacaatggtcggtattgcaacttttgattgcagtattcatttt
tacaatctgagacgagcctcgcagcagcctttgatgctcattgtgccagatgttcatgat
gtttatacacctcttcatactgatgtagtggttccccttaccgagtgccgtcaaagtttt
gaacagttactagagagcatcccaagtctgtttgaaaataataaggttgctgattctgca
ttcggtgctgcagtcaaggctggattcttggcacttaaacctacaggaggaaagcttctt
gttttccagtcagtcttgccatcaattggtattgcatctctttcttccagagaagctgaa
gggagaacgaatatttctgctggtgataaggaggcacataagttgtttcaaccagcagac
aagacactgaaaacaatggccattgagtttgctgagcaccaggtttgtgttgatatattt
atcaccgctcagacttttgtggacattgcttccatttccgttgttcctggaactactgga
ggacaggtatattattattatccattttctgctgtctctgatcctgggaaactctacaat
gatcttagatggaatcttagtagaccccaaggttttgaggcagtgatgcgggttagatgc
agccagggccttcaagttcaggaatatgctggaagcttttgcaagcgcattcccactgat
attgatcttcctgcaatagactgcgataaaactataatggttactttcaaatatgatgat
aagttccaggagaattcagaatgtgcctttcagtgtgcacttctttacactactgtgtat
ggtcaaagaagaattaaagttataaacctctcccttccttgcactagcatgcttagcaat
cttttccgtacagctgacttggatacccagtttgcctgtatcctcaagcaagcggcaagc
agcatcctagtgaactcgctttctcaagtccgtgagcagatcataaacctctgcatcaac
atcttacatgcctaccgtaagttttgcgcgacagtatcatcttcaggccagctaattctt
cctgaagctctgaagctattgcctctctatacactagctttggttaaaagcattggttta
cgcaatgatggccggttggatgatcgttgttattgggtcagccatgttatgtcactttcc
atttctttggctattccattagtatatcccagaatgatatctattcatgatcttactgag
aaggaaaatgatggttctctttcatcttccacaattcctctctcaagtgagcacataaat
gatgatggaatatatcttcttgaaaatggtgaagattgcttaatctatgttggaaacatg
gtcaacccagacacacttcaaaaattgtttggagtaacttctgtcgatgggctttcaact
cagcttgtattgcagcaatttgataacgacttgtcagagaagctaagtgatgtcattaat
gagataaggcagcagagatgttcatacctgcgtttgcgactatgcaggaagggtgacccc
acaggcacgcatttcctgtcgtatatggttgaggataaaactcctggaggcctctcttat
gttgagttccttgtacatgttcaccggcaaattcaaaccaaaatggcatga
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