Zingiber officinale (ginger): 121969873
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Entry
121969873 CDS
T08725
Name
(RefSeq) luminal-binding protein 3-like
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03060
Protein export
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
121969873
04141 Protein processing in endoplasmic reticulum
121969873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
zof03110
]
121969873
04131 Membrane trafficking [BR:
zof04131
]
121969873
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121969873
Enzymes [BR:
zof01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
121969873
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP70 / DNAK
121969873
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
121969873
Autophagy
ER-phagy
ER stress-related proteins
121969873
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121969873
Exosomal proteins of other body fluids (saliva and urine)
121969873
Exosomal proteins of colorectal cancer cells
121969873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FGGY_C
Radial_spoke_3
DDR
FtsA
ParM_N
Motif
Other DBs
NCBI-GeneID:
121969873
NCBI-ProteinID:
XP_042376095
LinkDB
All DBs
Position
4A:complement(43908557..43914027)
Genome browser
AA seq
667 aa
AA seq
DB search
MASSLLNRRSLILLGLLLAGSLFAFSVAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEI
IANDQGNRITPSWVAFTDSERLIGEAAKNLAAVYPERTIFDVKRLIGRKFEDKEVQRDMK
LVPYKIVNKDGKPYIQVKIKDGEVKVFSPEEISAMVLTKMKETAEAFLGKKIKDAVVTVP
AYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVS
ILTIDNGVFEVLATHGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDNRALGKLRRESE
RAKRALSNQHQVRVEIESLYDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLQK
HQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEET
KDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERS
LTKDCRLLGKFDLSGIPPAPRGTPQIEVTFELDANGILNVKAEDKGTGKSEKITITNEKG
RLSQEEIDRMVQEAEEFAEEDKKVKEKIDARNQLETYVYNMKNTINDKDKLADKLEGEEK
EKIEVAVKDALEWLDDNQSAEKEDYDEKLKEVEAVCNPIISAVYQRSGGAPGGGADDADD
DDSHDEL
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcgctgctgaatcgtcggtccctgatcctgttgggtctcttgctcgctggg
tctttgtttgcattctcggttgctaaagaagaagccaccaagttgggaactgttattggg
attgatcttgggaccacctactcttgtgttggtgtctacaagaatggacatgtggagatc
atagccaatgaccaaggaaaccgcattacaccatcttgggttgctttcactgattctgag
agactgattggtgaggctgcaaagaatctggcagcagtgtacccagaaagaactatcttt
gatgtcaagagacttattggaagaaaatttgaggataaagaagttcaaagggacatgaaa
cttgtcccgtacaaaattgttaacaaagacggcaagccttatatccaagtcaagatcaag
gatggagaagttaaagttttcagtcctgaggaaataagtgccatggttttgactaagatg
aaggagacagcagaagctttccttggaaagaaaattaaggatgctgtggttactgttcca
gcttatttcaatgatgctcaaagacaggcaaccaaagatgctggcataattgctggcttg
aatgtggccagaataatcaatgaaccaacagctgctgccatagcatatggtctggacaag
aagggtggtgagaaaaacattcttgtttttgaccttggtggtggcacattcgatgttagc
atcttgacaattgacaatggagtttttgaagttctggcaacacatggtgatactcatctg
ggaggagaggactttgatcagcgagtgatggagtattttatcaaattgattaagaagaag
catggaaaggacattagcaaggataatcgtgctcttgggaagttgaggagagagagtgaa
cgtgccaagagagctttgagtaaccagcaccaagtccgcgtcgagattgaatcactttat
gatggcttggatttctcagagcctctaactcgtgcccgttttgaggaattgaataacgat
ttattcagaaagacaatgggacccgtgaagaaagccatggaagatgcagggttgcagaag
catcagattgatgagattgtccttgtcggtggtagcactaggattccaaaggttcaacaa
ctcctgaaggattactttgatggcaaagagccgaacaagggagttaacccagatgaggct
gttgcatatggtgcagctgtacaaggaagcattcttagtggtgaaggaggtgaagaaact
aaagacattcttcttctggatgttgctcctcttacccttggtattgaaactgttggcgga
gtgatgactaagttgattccaaggaacactgtcatcccaaccaagaaatctcaagttttc
actacttaccaagatcaacagactacagtctccatccaggttttcgaaggtgagaggagt
ctcacaaaagattgcagactgcttgggaagtttgatttatctggaattccaccagcacca
agaggcacacctcaaattgaagtcacctttgagcttgatgcaaatggtattctaaatgtg
aaggcagaagataagggcactggcaagtctgagaagatcaccatcaccaatgagaagggt
cgcctcagccaggaagagattgaccgaatggtccaggaggctgaggagtttgctgaggag
gacaagaaggtgaaagaaaagattgatgctcggaaccagttggagacctatgtttacaac
atgaagaacactatcaatgacaaagacaagcttgctgacaagcttgagggtgaagagaag
gagaagatagaggtggccgtgaaggatgcacttgagtggctcgatgacaaccaaagcgca
gagaaagaggactatgacgagaagctcaaggaggtggaagctgtttgcaaccccatcatt
tctgcagtgtatcaaaggtctggtggtgcaccggggggtggtgctgatgatgcagatgat
gacgactcacacgatgagctttaa
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