KEGG   Zingiber officinale (ginger): 121969874
Entry
121969874         CDS       T08725                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    121969874
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    121969874
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     121969874
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 DUF2981 Zn_ribbon_RanBP eIF-4B
Other DBs
NCBI-GeneID: 121969874
NCBI-ProteinID: XP_042376096
LinkDB
Position
4A:44000772..44016142
AA seq 657 aa
MCIQSVGTFCTNRTNSGGSMSKLEIASSEGGTWCCSICTYENSQRFIACELCGILRNSSV
KFEIDDQAVNRTSMNSEVSLMGRSLFYQSSNRMPKESVICASFLNNKAGEPLEKGQLSAL
IDLQNIFLSPCCNQTKHIEAFRFDTPSPDDLVSSGKSTRAFDKVDSMLSTSLKNIRTATR
KKGIVELLPDNQVPEILVASSLPNSHNDNVSGNPSSSRGGSPNSSREEKQKLANNLQILK
LEYSTTSGHEKTNSVSDYKPEDWMLSDKGRTINQLNLAIVGHVDCGKSTLSGRLLQLLGK
ISKKEMHRYERESKEKGKSSSAYAWALDASVEERERGVTMTVAVAYFSTKRYRVVLLDSP
GHKDFVPNMISGATQADAAVLVVDAAMGAFEAGMGGKITGQTKEHAQLIRSFGVEQIIVA
VNKMDLVDFSKDRFDYVKLQLGHFLRTCGFKESCVTWIPLSSLDNQNLLTTASDIRLSSW
YQGYCLLEAIDGLPPPQRDFSKPFLMPICDVIVKHSSAQVAACGKIETGAIRIGSKVIVM
PSGNLATVKNIERDSSPCNVARAGDNVAVSLHGVDAGHVIQGGVLCHPDFPVNIASNLEL
KVLILDIETPIIVGSQVELHVLHSKQAAKVVKLQSLLDPKTGHVIKNTPRFLVARQS
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgtgcatacagtcggttggaactttctgtaccaacagaacaaactctggagggagcatg
tcaaaactagaaattgcatcaagtgaaggtggtacttggtgttgttccatttgcacatat
gagaatagtcaacgttttattgcttgtgaactatgtggaattcttcggaattcctctgtg
aagtttgaaattgatgatcaagcagttaacagaacaagcatgaattctgaagtttctctc
atgggcagatcattattttatcaatcatctaataggatgcccaaggaatctgtcatctgt
gccagcttccttaacaataaagctggtgaaccgcttgagaaaggacaactttctgcactc
attgatctccagaacatatttttgtctccatgttgcaatcaaaccaaacatatagaagcc
ttcaggtttgatacaccatccccagatgatttagtttcttctgggaagagcacaagagct
tttgacaaggttgactcaatgctttcaacatctctgaagaatatacgaactgcgactagg
aaaaagggaatagtagaacttttacctgacaatcaagtgccagagattttggtggcatca
tctttgccaaactctcacaatgataatgtaagtggaaatcccagtagttcgagaggggga
agtcccaacagttcaagagaggaaaaacaaaagttagctaacaatctccaaatcttgaag
ttagagtactctacaactagtggacatgaaaaaaccaattcagtttctgactacaaacca
gaggattggatgctttctgacaaaggaagaaccataaaccagttaaaccttgcaattgta
ggtcatgttgattgtggaaaatccacattgagtggaagattgctacaacttttggggaaa
atttctaagaaagagatgcatagatatgagagagagtcaaaggaaaagggaaaaagttca
tctgcctatgcatgggcattagatgcaagtgttgaggagagggaaaggggcgtaacaatg
acagttgctgttgcatacttttcaacaaaaagataccgtgttgttttgctggattcacca
ggtcacaaagattttgttccaaacatgatatctggtgcaactcaagcagatgctgcagtt
ttggttgtagatgctgctatgggtgcatttgaagcaggtatgggtggcaaaattactgga
caaactaaggaacatgcacagcttattaggagctttggtgtcgagcaaataatagtagca
gtcaataagatggatcttgttgacttctccaaagatcggtttgactatgtaaagctgcaa
ttgggccatttcttacgtacttgtggattcaaggaatcatgtgtgacatggattcctcta
agttccctggacaatcaaaatttgctcacaactgcttctgacattcgcttgtcttcttgg
taccaaggatattgtcttctggaagccattgatggtttaccacctcctcagcgggatttt
tcaaagccatttcttatgcctatatgtgatgttattgttaaacattcatcagcacaagta
gctgcttgtgggaaaatagagactggagctattcgaattggttccaaggttatagtcatg
ccttcaggaaatctagctactgtaaaaaatatagagagggattcttctccttgcaatgta
gcaagagctggtgacaatgtggctgtcagtttacatggtgttgatgcaggacatgtgatc
caaggtggagttttatgccacccagatttccctgttaacattgcatctaacttagagctg
aaggttctcatcctcgacattgaaactccaattattgttggatctcaggttgagctccat
gtacttcactcgaagcaagctgcaaaggtggtaaaactacagtccctgttagatccaaaa
acaggacatgttataaagaacacaccacgtttcctcgtagccagacagagctag

DBGET integrated database retrieval system