Zingiber officinale (ginger): 121970048
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Entry
121970048 CDS
T08725
Name
(RefSeq) ribosome biogenesis protein bms1-like
KO
K14569
ribosome biogenesis protein BMS1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121970048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121970048
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
90S particles
GTPase
121970048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
AAA_16
MMR_HSR1
AAA_22
AAA
Tenui_NS3
Motif
Other DBs
NCBI-GeneID:
121970048
NCBI-ProteinID:
XP_042376388
LinkDB
All DBs
Position
4A:complement(84456297..84476986)
Genome browser
AA seq
1199 aa
AA seq
DB search
MAIDQEQSHKSHRSHKAGASAKKKSKKGNSEEDGKNKNPKAFAFNSAVKAKRLQSRAAEK
EQRRLHVPTIDRSTGEQPPFVVVVQGPPKVGKSLLIKCLVKHYTKHNLSEVRGPITVVSG
KSRRVQFIECPNDINGMIDAAKIADLALMLVDGSYGFEMETFEFLNVLQNHGFPKVMGVL
THIDKFKDVKKLRKTKQRLKHRFWTEIRDGAKLFYLSGLIHGKYPKRETHNLARFISVMK
TQQLSWRSSHPYILVDRFEDVTPPERVHANMKCDRNITLYGYLRGSNMKRGTKVHITGVG
DFALTGVASLADPCPLPSSGKKKGLRDKEKLFYAPMSGLGELLYDKDAVYVNINDHLVQF
SKVDEETGSSGKGKPNDVGVTLVKTLQQTKYSIDEKLEQSFINLFSRKKPPASDNGHAKG
NVPDEQRHDGHSGGHVSILEEDANHSGDEVSEDDEAGKNNLTGDSDSDGFDEGNDYATDD
DLEDDEQMNPFSHDLNEEVELHNGRLRRKVTSSSFGNNDHLQDSGDDLQEFDDDSDNDGV
HDDKLHSSSESSEGDDDLNSGDEADHCSKWKESLLARAMSRKNGNLMQLVYGPSLPVLST
TSRDADDSSENDEEFFMPKGERTKKLGDNLSGDNLNAEDSSKFTNTHLKNWSDEDLIKSV
RDRFVTGDWSKAAQRGEGEGMGDDGTVFGDFEDLETGEVFKDIPGDNNNGGSKNIIKGND
PEMEERRLKKLALRAKFDAQANGSDLSDEEDHNKKKFHQNQAGEAGGYFDKLKTEIELRK
QMNISELADLDDATRIEVEGFKIGTYMRLEIHDVPFEMVEHFDPCHPIIVGGVGLGEDNV
GYMQVRFKRHRWHRKILKTRDPIIISVGWRRYQTVPVYTIEDRNGRYRMLKYTPEHMFCL
AMFWGPLVPPQTGVLALQTLNNQAGFRIAATGTVQEFNHETKIMKKIKLVGHPLKIFKKT
ALIKDMFTSDLEIAKFEGAAIRTVSGIRGQVKKAAKAELGDKPKQRWESGKEGVARCTFE
DRILMSDIVFLRAWTHVEVPQFYNPVTTSLQPRDQTWKGMKTIAELRRKNNLPIPHNRDS
DYKPIERRPRKFNPLVIPARLQAALPFESKPKNKLPRKRPLLENRRAVVMEPHERKVHAL
VQNLREIKSEKTRKLKLKEQEKRKAYEAEKLKDEQLSKKRQREERRERYRLQDKKRRKS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgatcaggaacaatcgcacaagtcccatcgatcacataaagcgggtgcttct
gccaaaaagaagagcaagaagggaaattcagaggaagatggaaagaataaaaatccaaag
gcatttgcttttaattcggctgtgaaggccaagcgacttcagtctcgagctgcagagaaa
gaacaacgcaggcttcatgttcccaccatagatcgttctactggggagcaacctcctttt
gttgttgttgtgcagggacctcccaaggttgggaaatctcttctgattaaatgtttggta
aagcattacactaagcacaatctttctgaagttcgtggtccaattactgtcgtgtcagga
aagtcaaggagggtgcagtttattgagtgcccaaatgatattaatggtatgatagatgca
gcaaaaattgctgaccttgcactgatgctagttgacggtagttatggttttgagatggaa
acgtttgagttccttaatgtgttgcaaaatcatggtttcccaaaggttatgggagttctt
acacatattgacaagttcaaggatgttaaaaagttgaggaaaacaaaacagcgattgaag
catagattttggaccgagattagagatggcgcaaagttattctatctatctgggctaatt
catggaaagtacccaaaacgtgaaactcacaatcttgcaaggtttatctcagtaatgaaa
acccaacaattgtcttggagatcttctcatccttatatattggtagatcgctttgaagat
gtcacccctcctgaaagagtgcatgcaaatatgaaatgtgacaggaacatcacgttgtat
ggctatctccgaggtagcaatatgaagagagggaccaaggtgcatattactggtgttggt
gattttgcattaactggagtagctagcctggctgatccctgtcctttaccctcatctggc
aaaaagaagggtctgcgtgacaaggaaaaattattctatgctcctatgtcgggtcttggg
gagctgctttatgataaggatgcggtgtatgtaaacataaatgatcatcttgttcagttt
tctaaagttgatgaagaaactggctcctctgggaaaggaaaacctaatgatgttggagta
acattggtaaaaacacttcagcagactaaatattccattgatgagaagttggaacaaagt
ttcataaatcttttcagtagaaaaaagcctcctgcttccgataatggccatgcaaagggt
aatgtaccggatgaacagcgccatgatgggcacagtgggggacacgttagcatcctggaa
gaggatgctaatcattctggtgatgaagtatcagaggatgatgaagctgggaaaaacaat
ctcacaggagatagtgattctgatggttttgatgaagggaatgattatgccacggatgat
gatcttgaagatgatgaacagatgaatccattcagccatgatctcaatgaagaagttgaa
cttcataatggaaggttaaggagaaaggtgacctcatctagctttggaaataatgatcat
ttacaggattctggagatgatttgcaagagtttgatgatgacagtgacaacgatggtgtt
catgatgataaattgcattctagttcagaatcttctgagggtgatgatgatctcaactca
ggtgatgaagctgaccattgttcaaagtggaaagaatcattgcttgctagggcaatgtca
agaaaaaatggtaacctaatgcaacttgtatatggacccagcctaccagtattgtctacc
acttcaagggatgcagatgacagtagtgagaatgatgaagagtttttcatgccaaaagga
gagagaacaaagaaattaggggacaacctgagtggtgataatctcaatgctgaagatagc
tcaaagttcaccaacactcaccttaagaattggtctgatgaagaccttataaaatctgtc
cgtgatcgctttgtaacaggagactggtccaaggcggcgcaacgaggtgaaggggaaggt
atgggagatgatggaacagtttttggtgattttgaagatttagaaactggagaagtgttc
aaggatattccaggagataataataatggtggtagcaaaaatattatcaaggggaatgac
cctgaaatggaagagcgaagacttaaaaagcttgctctccgtgcaaagtttgatgcccaa
gctaatggatctgacttatctgatgaagaagatcataacaaaaagaaatttcatcaaaat
caagctggtgaggctggtggatattttgacaaattgaagactgagattgaacttcgcaaa
caaatgaacatatctgagcttgctgatcttgatgatgcaactcgtatagaggtggagggc
ttcaaaattggcacttatatgagattagaaattcatgatgttccatttgagatggttgag
cattttgatccctgccaccctatcatagttggaggtgttggtcttggcgaggacaatgtt
ggatatatgcaggttcggtttaagcggcaccgatggcatagaaaaattcttaagacacgt
gatccaattataatatcagttggttggaggcggtaccagacagttcctgtgtataccatc
gaggatagaaatgggcgctaccgcatgctgaaatacacaccagagcatatgttttgctta
gccatgttttggggtcctcttgttcctcctcaaactggagtacttgcactgcagacctta
aacaatcaagctggatttcgaattgctgctacaggcacagtgcaagaattcaatcacgaa
acaaagataatgaagaagatcaaacttgttggtcatccattaaagatattcaagaagaca
gcactcatcaaagacatgttcacttctgacttggaaattgctaaatttgaaggtgcagct
attaggactgtgagtggcataagagggcaggttaagaaggcggcgaaggctgaattaggc
gacaagccaaagcagcgatgggagagtgggaaagaaggggttgcaaggtgcacatttgaa
gatagaattctaatgagtgacattgttttcctgcgggcatggactcatgtagaggttcca
cagttctataaccctgtcactacatccttgcaaccaagagatcaaacatggaagggcatg
aagacgatagccgagcttcggcgcaaaaacaaccttcccataccgcacaatagggattca
gattacaagccaattgagcggaggccaagaaagttcaatcctctggtgatcccagcaaga
ttacaagctgctctgccttttgagtccaaaccaaaaaacaaactacctcgtaagcgacca
ctgcttgagaatcgccgtgctgtggtaatggaacctcatgaacgaaaggttcatgctctt
gtccaaaaccttcgggagatcaagagtgagaagacgaggaagctgaagctcaaggagcaa
gaaaaaaggaaagcatatgaagcagaaaaactgaaagatgagcagttatcgaagaagagg
caaagagaagagcgacgagaacgttatcgcttgcaagacaaaaagagaagaaaatcataa
DBGET
integrated database retrieval system
