Zingiber officinale (ginger): 121970086
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Entry
121970086 CDS
T08725
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 4-like isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
121970086
Enzymes [BR:
zof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
121970086
Glycosyltransferases [BR:
zof01003
]
Polysaccharide
Structural polysaccharide
121970086
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
121970086
NCBI-ProteinID:
XP_042376439
LinkDB
All DBs
Position
4A:86801210..86815745
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AA seq
502 aa
AA seq
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MTGGVVAVEACGLPQVRTTVPARARRQAWFVTACGCVLLWTCLIQLLTYGRVWRGWNPAR
LFLVIRDGVPAVESSFAPPPLVAPSPVLRSSNYTSNGYLKLSCNGGLNQMRAAICDMVMV
ARLLNLTLVVPELDKNSFWADPSNFDDIFDVRHFITSLKDEVHIIKKLPKSISRNTSSHF
LMMRPVSWSDERYYLQKILPLFNKFNVIQFNKTDARLANNLAFELQKLRCRVNYHSLKFT
PQIMTLGNKLLHILRGKGSFVALHLRYEMDMLAFSGCTHGCSEKEVEELKSLRYAYPWWR
EKEIDSVAKRLQGLCPLTPEETTLILKALGFDKDTVIYIASGEIYGGEERLSVLRAEFPN
LVKKETLLHPEDLHQFQNHSSQMAALDYMVSLESDIFIPTYNGNMAKVVEGHRRYLGFRK
TMLLNRRKLVEFLDMHNNKTLPWDDFASSAKRVVDESLGQPTCRKVLTDKPKEEDYFYAN
PQECLPNAKDCLKVLGNSSTAR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgactgggggcgtcgtcgcagttgaggcctgcgggctgcctcaggtgagaacgacggtg
ccggcgcgggcgcggcggcaggcgtggttcgtgacggcgtgcggttgcgtgctactctgg
acgtgcctgatccagctccttacctatggccgtgtctggcggggttggaatcccgcgcgg
ttattccttgtcatcagggacggcgtccctgcggttgaatcgagtttcgctcctccgccg
ctcgtggctccgtctccagtgctacggtcgagcaattatacaagcaatggttatctgaaa
ctatcatgcaatggaggcttgaaccaaatgcgtgcagcgatatgtgacatggtgatggtg
gctcgcttactaaacctaacattagtggtcccggaactggacaagaattcattctgggct
gacccaagtaattttgatgatatctttgatgtgaggcatttcatcacatcattgaaagat
gaagtgcacataattaaaaagctaccgaagagcattagtagaaatacttcaagccatttt
cttatgatgcgtcctgtgagttggtcagatgagagatactacttacaaaagattttgcca
ctgttcaacaagttcaatgtgattcagtttaataaaacagatgcacgattggcaaacaat
ctggcttttgagctccagaagcttagatgccgtgtaaactatcattcattgaaatttact
cctcagatcatgacattaggaaacaagttgcttcatattcttcgagggaaggggtccttt
gttgccttacatttgagatatgaaatggacatgctggctttctctggttgcactcatggt
tgttctgagaaagaagttgaagagcttaaaagtttaaggtatgcctatccatggtggaga
gaaaaagagattgattctgtggccaagagactgcaaggtttgtgcccacttacacccgag
gagaccacccttatcctcaaagcattgggatttgacaaggatactgtaatatatattgcc
tccggtgagatttacggtggggaagagaggctatcggtattgcgtgcagaatttcccaac
cttgttaaaaaggaaacgttgcttcatccagaagatctgcatcagtttcagaatcactcg
tcccaaatggctgcactcgattatatggtttctttggagagtgacattttcatcccaaca
tacaatgggaacatggctaaagtcgttgaggggcatcggaggtaccttggttttcggaaa
accatgttgctgaaccgcaggaaattggtcgagttcctcgatatgcataacaacaagaca
cttccatgggatgactttgcatcttctgctaagcgcgttgttgatgagagccttggacaa
ccgacctgtcgaaaagttcttaccgacaaacccaaggaggaagactacttctatgccaac
ccgcaagagtgcctacccaatgccaaagattgccttaaggtattgggaaattcaagcacg
gcgagatga
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