Zingiber officinale (ginger): 121970128
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Entry
121970128 CDS
T08725
Name
(RefSeq) F-box/LRR-repeat protein 14-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121970128
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121970128
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
F-box_5
LRR_At5g56370
LRR_14
F-box-like
LRR_4
F-box
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
121970128
NCBI-ProteinID:
XP_042376538
LinkDB
All DBs
Position
4A:89788207..89794747
Genome browser
AA seq
470 aa
AA seq
DB search
MGFLVEDFPKELLVDIVKRIERTADRNSISLVCKRLYEIDREHRDFLKVGSGLHPATEAL
TALCLRFANIKTLEITYFGWMSNSGKQLDNQGLFVLCSNCPLLTELTLSFCSFINDSGLA
YLSSCPKLRSLKLNFAQSISSNGILSLVVGCKNLSALHLIRCMRVTSVEWLAYLGQFGKL
QDLSIKYCKGISEDDMIKLGPGWNNLRHFEFEMDAYYRHPKVYDNSLTEKWANHLNCENL
RELILVNCILPRSRGLCCLLWRCEALIRLNLDMCIGVKDSDMIALSQKSRNLRSISIRIP
SRYFVSIYQTSSLRFSDESLTALSIGCLLLEVFELSFSDGEFPSLSCLTQSGILTLIQSC
PIRILVLDSTCFFNDIGMEALSTAPYLQTLKLVKCQEVTDEGMQLIACFPCLTTLSLCKC
LGITDDGFKLLIGLHKLDLLIVEDCPQISEDGVQRAARVVSYKQDLSWLY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcttggtggaagattttccaaaagaattgcttgtcgatattgttaagagaata
gaaagaactgccgacagaaattcaatttctctagtatgcaagcgtctatatgaaattgat
cgagaacatagggatttcttaaaggttggatcgggattacaccctgcaacagaagcacta
actgccctctgcttgcgctttgctaatataaagacactagaaattacctactttggctgg
atgtctaactcgggcaaacaattagataaccagggcctttttgtgctgtgttccaattgc
cctttgcttacagaactcactttaagtttttgttcatttattaatgatagtggccttgca
tacctatcctcttgcccaaagcttagatccctcaagctaaattttgctcaatcaatcagt
tctaatggcattctctcacttgttgttggttgtaagaatctttctgctcttcatctcatt
cgctgcatgagagtgaccagtgttgagtggcttgcttatcttggtcagtttggaaagctt
caggatctttcaataaaatattgcaagggtattagtgaggacgatatgataaaacttggt
cctggatggaataatcttaggcatttcgagttcgagatggatgcatattacaggcaccca
aaagtttatgataattcattgacagaaaaatgggcaaatcatctgaactgtgaaaatttg
cgagagcttatcttggtgaactgcattttgcctcgaagcagagggctttgttgtttgcta
tggagatgtgaagcactcattaggcttaacttggatatgtgcattggggtcaaggacagt
gatatgattgcattatctcagaagtcaaggaacctaagaagtatttcaattcgtatccct
tcacggtatttcgtgtctatttaccaaaccagttcactgagattttctgatgagtcattg
acagcattgagtattggatgtctgctgctagaagtgttcgaactatccttttctgacgga
gaattcccatccttatcttgcttgacacagagtggtatccttacattaatccaaagttgt
ccaatccgaattttagtactcgactctacttgcttctttaatgacattgggatggaagcc
ctttctactgccccctacttgcagacactgaagctagttaaatgccaagaagttacagat
gagggaatgcaacttattgcatgctttccttgcttaactactctttcactctgcaaatgt
ttaggcattacggatgatggatttaagctgctaattgggttacacaagttggatcttctg
atagtagaggactgccctcagatttctgaggatggtgtacaaagggctgccagggttgtt
tcttacaagcaggatttgtcttggctttactaa
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