KEGG   Zingiber officinale (ginger): 121970132
Entry
121970132         CDS       T08725                                 
Name
(RefSeq) F-box protein SKP2A-like
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121970132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    121970132
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     121970132
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_At5g56370 LRR_4 F-box-like LRR_NXF1-5 LRR_8 F-box LRR_At1g61320_AtMIF1 zf_DPOE_2 LRR_RPS2
Other DBs
NCBI-GeneID: 121970132
NCBI-ProteinID: XP_042376561
LinkDB
Position
4A:89983849..89987756
AA seq 370 aa
MGGGNPETVNLEVCFRSLMVAGGSQEKVERSMVVMQGWKDLPVELLLRILSLVGDDRTVV
VACGVCKGWRIALSLGLTNLSLAWCKNNMNNLVQSLIPKLPKLQVLSLRQNYSPQLEDND
VETISKHCHELRDLDLSKSQKLTDRSLYALGHGCPHLAKLNISGCSGFTDASLEYLARCF
KNLKYLNLCGCAKAASDRALHAISCNCNGLQSLNLGWCEGVSDKGVISLAAGCPDLQALD
LCGCILITDESVVALANGCPRLRSLGLYYCQNITDRAMYSLANSLVSSKHGPWKIKKGYQ
SGLMSLNISQCTALTPPAVQAVCNSFPELHTCPGRYSLLISGCLSLTSVHCACAAQDNRA
SRSAFPNHAY
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgggaggcggcaatccagaaactgtgaatttggaggtttgcttcaggagccttatggtt
gccggcggcagccaagagaaggtggagaggtcaatggtggttatgcaaggttggaaggat
cttcctgtggagctactgcttcgaatcctctctctcgtgggtgatgatcgcactgtggtt
gtggcttgtggtgtttgcaaagggtggagaattgctctgagcctggggcttacaaatctc
tcgcttgcatggtgcaaaaataacatgaacaatcttgtgcaatcgcttatccctaagtta
ccaaagctgcaagttctatcgcttcggcaaaattacagtcctcaacttgaggacaatgat
gttgagactatatccaagcactgccatgaattaagggatttagaccttagcaaaagtcag
aaactaactgaccgttcattgtatgctttgggccatggatgtccccacttagcaaaactc
aacataagtggatgctcaggttttactgatgcttcccttgaatatctggcaagatgtttt
aaaaatttaaaatacttgaatctctgtggatgtgcaaaagctgcatctgaccgagctcta
catgctatttcatgcaattgcaatggcttacagtcattgaatcttggttggtgtgagggc
gtcagtgacaagggagttatcagtttggcagcaggttgccctgatctccaagctttggat
ctgtgtggttgtattctcatcaccgatgagagtgtggttgcattggcaaatggttgcccg
cgactaaggtccctcggcctgtactactgccaaaacatcaccgacagagccatgtactcg
ctagccaatagtctagtgagtagcaagcatggaccatggaaaatcaaaaaaggttaccag
agtgggctgatgagcctcaatatcagccagtgcactgccttaactccgcctgctgttcaa
gccgtctgcaactcatttccagagctgcatacttgtcctggcaggtattcgctccttatt
agtggctgccttagtcttacctctgtgcactgtgcctgtgctgcccaagataaccgtgcc
agtagatctgcatttccaaatcacgcttactga

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