KEGG   Zingiber officinale (ginger): 121970134
Entry
121970134         CDS       T08725                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121970134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    121970134
Spliceosome [BR:zof03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121970134
 Complex B
    121970134
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4 HATPase_c
Other DBs
NCBI-GeneID: 121970134
NCBI-ProteinID: XP_042376564
LinkDB
Position
4A:90061520..90063227
AA seq 286 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYHRPDMITP
GVDAQGQPIDPEKIQEHFEDFYEDIFEELNKFGELESLNVCDNLADHMIGNVYVQYREED
QAAAAMRALQGRFYSGRPIIIDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL
RRKLFGRYRRTGMRRSRSRSHSPSPYHKKSSRDYDRGDNRVRGDYRDRGDYYDGGRSGDR
HGSHEKDGGRRRHGSPRRTKSPVREGSEERRAKIERWNREREQKQG
NT seq 861 nt   +upstreamnt  +downstreamnt
atggcggaacacttggcttctatctttggcacagaaaaggacagggtgaactgcccattt
tacttcaagattggagcttgccggcatggggataggtgctcacggctccacaaccgcccc
actatatccccaaccttgctgctttccaatatgtatcaccgacctgacatgatcactcca
ggtgttgatgctcaggggcagccaattgatcctgaaaagatccaagagcactttgaggat
ttttatgaggacatttttgaggagcttaataagtttggtgagctcgagagccttaatgta
tgtgacaaccttgctgaccatatgattggaaatgtctatgttcagtatagggaagaggat
caagcagctgctgcaatgagggccttacagggacggttctactcaggacggcctataatt
atcgatttctcgcctgtcacagactttagggaagccacgtgccgtcagtttgaagaaaat
agttgcaaccgtggtggatattgcaatttcatgcatgtgaaacaaattggtagggaatta
cgaaggaagttgtttggccggtaccgaagaactggcatgcgaagaagtagaagtcggagt
catagtccaagcccatatcataagaagagttcacgtgattatgatcgtggtgacaatcgt
gttcgtggtgattatcgtgatcgtggtgattattatgatggtgggaggagtggggacaga
catggaagccatgaaaaagatggaggtagacggagacatggaagcccaagacgcactaag
agtccagttagggaaggaagcgaggaacgtagagctaaaattgagcgatggaaccgagaa
agggagcagaaacaagggtga

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