Zingiber officinale (ginger): 121970170
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Entry
121970170 CDS
T08725
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121970170
03036 Chromosome and associated proteins [BR:
zof03036
]
121970170
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121970170
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121970170
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121970170
microRNA pathway
RISC loading complex
121970170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
121970170
NCBI-ProteinID:
XP_042376620
LinkDB
All DBs
Position
4A:92750704..92760651
Genome browser
AA seq
957 aa
AA seq
DB search
MLDAVERERPFFLSSPSLFAAVATMPTRQVSSQLKAEKHILSKKPVQSSMKQHKADVVPP
KEPKSADRRRRRGRGKPTDPRQAKLDQEAANESVSPPVSSKGIAFCRRPGFGQEGTRCIV
KANHFLTELPDKDLTQYDVIITPEVSSRSTNRAIIAEMVRLYRETELGMRLPAYDGRKSL
YTAGSLPFHSKEFAVNLVEDDEGTGLSRVKEYRVSIKFAARADLHHLRQFIAGRQTDAPR
EALQVLDIVLRELSNQRYISVGRCFYSPDIRKPQRLGDGLQSWCGFYQSIRPTQMGLSLN
IDMSSTAFIDPLPVIEFLAQILGKDVSSRPLSDADRIKIKKALRGVKVEVTHRGNVRRKY
RVSGLTSQPTRELIFPVDDQMNMKSVVEYFKEMYGFTIQYAHLPCLQVGNQKKANYLPME
ACKIVEGQRYTKRLNEKQITSLLKVTCQRPREQEMDILQTVRQNAYGNDPYAKEFGINIS
DKLTSVEARVLPAPWLKYHETGKEKECLPQVGQWNMMNKKVINGCKVSHWACINFSRSVQ
ENTAHSFCQELAQMCQVSGMEFNREPVIPIHSARPEQVEKALRHVYNAATNKLKGKELEL
LVAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNT
VLLDAISWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDWPEVTKYAGLVCAQ
AHRQELIQDLYKTWHDPQRGIVTGGMIRELLISFRKATGQKPLRIIFYRDGVSEGQFYQV
LLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFTNNHKDRSSTDKSGNILPGTVVD
SKICHPAEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEMQTLTNNLCYTYARCTRSV
SIVPPAYYAHLAAFRARFYMDPEVAESPPQSMHQTNGSSVKPLPALKDKVKRVMFYC
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgctagatgctgtagagagagaaaggcctttcttcctctcttcgccgtcgctgttcgcc
gcagtcgccaccatgcccactcgtcaggtgtccagccagctcaaggccgagaagcacatc
ctctccaagaagcccgttcagagcagcatgaagcaacacaaggctgacgtcgtcccgcca
aaggagcccaagagcgccgatcgccgacgaaggagagggagagggaagccgacggacccc
cggcaagcaaagctcgatcaggaagctgcaaatgagagcgtttctcctcctgtttcgagc
aaaggtatcgcattttgccgacgtccggggtttgggcaggagggcacccggtgcattgtc
aaggccaaccatttcctcactgagttgcccgataaggacttgactcagtacgatgtgata
atcacgccggaagtgagctcgcggagcacaaatagggctatcattgcagaaatggtacgg
ttgtatagggagactgagttgggcatgagacttcctgcttatgatggaaggaaaagtctt
tacacagctgggagtttgcctttccactccaaggagttcgcagtaaatcttgtggaggat
gacgagggaacgggattgtctagagtgaaggagtatagagttagcatcaagtttgctgct
cgagctgaccttcaccatttgagacaattcatcgctggacggcagactgatgctcctaga
gaagcccttcaagttctcgatattgttttaagggaattatcaaatcaaagatacatatcg
gttggaagatgcttttactcaccagatatcagaaagccacaacgcctgggcgacggttta
cagtcatggtgtggcttctaccaaagcattagaccaacacagatgggactttcactgaat
attgatatgtcatccaccgctttcatcgatcctcttcctgtgatcgagtttttagctcag
atcctaggcaaagatgtatcatctaggccattgtcagatgctgatcggataaagatcaag
aaagctctgagaggggttaaagtagaggtcacacacagaggaaatgtgcgacggaaatat
cgagtttctggcttgacatcacaacctacaagggaactcatttttccagttgatgatcag
atgaatatgaaatctgtggttgaatatttcaaagagatgtatgggtttacaattcagtat
gctcatcttccttgccttcaagtaggaaatcagaagaaagcaaattatctaccaatggag
gcttgcaaaatagtagagggtcagagatacacaaagaggttgaatgaaaagcaaattact
tccttgctaaaagttacatgccagagacccagagaacaagaaatggatattttacagaca
gttcgccaaaatgcttatgggaatgatccctatgcaaaggaatttggaataaacataagt
gacaagctaacctcagtggaggcccgagtacttcctgctccatggctaaagtaccatgaa
actggcaaagaaaaggagtgtctacctcaagttggtcagtggaacatgatgaataagaaa
gtgatcaatggatgtaaagtaagtcattgggcttgtattaacttttctcgaagtgttcaa
gagaacacagctcatagtttctgtcaggagctagcacaaatgtgccaagtctctggaatg
gaattcaatcgagaaccagttatcccaattcactctgctagacctgaacaagtggagaag
gccctaagacatgtatataatgcagcaacaaacaaactaaaaggcaaagaacttgagctt
cttgtagccatccttcctgataataacggttctttatacggtgatcttaaacgaatatgt
gaaactgatttggggttgatctcacaatgctgcctaacaaagcacgtgttcaagataagc
aaacaatatcttgcgaatgtctcactcaaaattaatgtcaagatgggaggaagaaatacc
gttctcctagatgctataagttggagaattccattagtgagtgatattccgacgattata
tttggagcagatgtaacacaccctgagacaggagaagattctagtccatcgattgctgct
gttgttgcctctcaagactggcccgaagtcacaaaatatgctggcttagtatgtgctcag
gctcatcgacaggaactgattcaggatctttacaagacatggcatgatcctcaacgtggc
atcgttacgggaggcatgattagggaacttctcatatcttttcgcaaggcaacagggcaa
aaaccattaaggattattttttacagggacggtgttagtgaaggacagttctatcaagtg
ttgctatacgaactagatgctattcgcaaggcatgtgcatccttggaaccaaattaccag
cctccagtgacgtttgtggtggttcagaaacgccatcatacgaggctatttacgaacaac
cacaaggacagaagtagcacagacaagagtggaaacatcctaccaggtactgtggttgat
tccaagatctgccatcctgctgagtttgacttctacctatgcagtcatgctggaatacag
ggtactagtcgaccagcccattaccacgttctatgggacgagaacaatttctcagcagat
gaaatgcagactcttacaaacaatctctgctacacgtatgctcggtgcacccggtctgta
tctatcgtgccgcctgcctattacgcccacctagctgcttttcgagctcggttttacatg
gatccagaggtagctgaaagtccaccgcaaagtatgcaccagacgaacggatcctctgtg
aaacccctacctgccttgaaagacaaggtgaagagggtaatgttctactgttaa
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