Zingiber officinale (ginger): 121970206
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Entry
121970206 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC121970206 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
121970206
Enzymes [BR:
zof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
121970206
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121970206
Prokaryotic type
121970206
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
121970206
NCBI-ProteinID:
XP_042376689
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Position
4A:complement(94505809..94514142)
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AA seq
515 aa
AA seq
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MATSKLWSTLFLSYSAAKLNPRLFARNPFSPARRLLSTTATPYPLYYELIRYRPVRGSTS
RRRLPNAHDGSDQPPPASSDAAEVLSDTAGSSSEAAMDRSKRRYYRKRQRRMYGGSDDED
RRRGAGDEYVELEPEVIDFPRLHPREEELYFYDAFAYPWEKDKHYRMVYQLEKKYFPQYS
LDKAFVDPMEPVPPASAEEGVVKKKGRKPKKGKDGSEEKDERALIFFEESVEKKDSLAIK
SVTEKKVEEFFKCLRKVPKAGNRQGAVAAPITVEQAESYLVNRKTELPPRWDGPSGTVVL
VDKPKGWTSFTVCGKLRRLVKVQKVGHAGTLDPMATGLLIVCIGKATKIVDRYQGMVKGY
SGVFRLGEATSTWDADSPVIQREPWEHIKDDDIKKAVKSFLGEIWQVPPMFSAIKVGGER
MYEKARKGETVELSPRRISIYQFDIERSLGDRQNLVFRVTCSKGTYIRSLCADLGKALGS
CAHLAALRRDSIGEYSVDDAWNFEELEEHITKGYL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccaaattgtggtctaccctcttcctctcctactcggccgccaaactcaac
cctcgtctcttcgccaggaaccccttctctcccgctcggcgcctcctttccaccactgcc
actccttatccgctatactacgagctcatccgctaccgtcctgtccgcggctctacctcc
cgccgtcggctcccaaatgcgcatgacggctccgaccagccgccccccgcatcgtcagac
gcagctgaagtactctccgacaccgccggctcctcctccgaggccgccatggaccgttcc
aagcggcggtactaccgcaagcggcaacgccgcatgtacggaggctccgacgacgaggac
cgccggcgcggcgccggagacgaatacgtagagctcgagccggaggtaatagacttccct
cgccttcacccacgcgaggaggaactttacttctacgacgcctttgcgtatccctgggag
aaggataagcactatcgcatggtgtaccagcttgaaaagaagtactttcctcagtattcc
ttggataaggctttcgtcgaccccatggagcctgtaccgccggcatcggcagaggaaggt
gtggtgaaaaagaaaggacggaagccgaagaaagggaaggatggtagcgaggagaaggat
gagagggctttgatcttttttgaagaaagcgtggagaaaaaggacagtcttgccatcaag
agtgtgacggagaagaaggtcgaggagttcttcaagtgtttgaggaaagtcccaaaggct
ggtaacaggcagggagctgtagctgccccaataacggtggaacaggctgagtcgtatctc
gtgaacaggaagactgagcttcctccaaggtgggatggcccatccgggactgtagttctt
gtggacaaacctaaaggatggacttcatttactgtttgtgggaagttgcgacgcttagta
aaagttcagaaggttgggcatgctggtactcttgacccgatggccacagggttattaatt
gtttgtattggtaaagccacaaaaattgttgacaggtaccaaggtatggttaaaggatat
agtggtgttttccgtctaggagaagctacatcaacctgggatgcagattcaccagttatt
caaagagaaccatgggaacacatcaaggatgatgatataaaaaaggcggttaaatctttc
ttaggagagatatggcaagttcctcctatgttttcagccattaaggttggcggtgaaaga
atgtacgagaaagcaaggaaaggagaaacagttgagttatcaccaagacgaatatcaata
tatcagtttgatattgagcgcagcttgggtgacaggcagaatctggtattcagagtaact
tgttctaagggaacatatatccgatctctttgtgctgatcttggaaaagctcttggcagc
tgtgctcatttggctgccctacgaagggattcaattggagaatattcagttgacgatgca
tggaacttcgaagaactggaagagcatatcaccaagggatacttatga
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