Zingiber officinale (ginger): 121970235
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Entry
121970235 CDS
T08725
Name
(RefSeq) autophagy-related protein 2-like isoform X1
KO
K17906
autophagy-related protein 2
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
121970235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121970235
03029 Mitochondrial biogenesis [BR:
zof03029
]
121970235
Membrane trafficking [BR:
zof04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
121970235
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121970235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
SMMA_C
Motif
Other DBs
NCBI-GeneID:
121970235
NCBI-ProteinID:
XP_042376735
LinkDB
All DBs
Position
4A:complement(95124207..95139974)
Genome browser
AA seq
1962 aa
AA seq
DB search
MFSRWDFSRSSVIKRVCKFLLKKKLGEVILGDIDLDQLDVQLGTGTIQLSDLALNVDFLN
QKIAGAPIVVKEGSIKSLSIKVPWKLRNCEIEIDEIELVLGPFNGSCATQANADSSLPHD
CQHHMNDNPDRIECEIAQDYHGSIPLDIHEGVKTIAKVVKWFLTSFHVRLNGVIVAFDPR
SHLDERRDKSCRLLVLRIKETEFGTHLSEDSMSKLTNFMKFQKANVEFLEMDDIDEGLEV
DNVTGRGLNGRLLNHGTTSILTGADGGFSVTLNLSIPWKNGCLDVSKVDAEVSIDPIELR
IQPSSINWVIAIWNSLENTKASECAHYHKASNSFNSTYRSHTAMTNTIYLDVDADTLTRG
SELSSVFSAITPETIPDALLMRTNFIHDWVPQHLYQEDPSSMVPDLSASIDQFFECFDEI
SSQGYSSTGSIWNWTRSVFNAISVASNLASGMGDVAKEQHVETSLRAAIAGISVIVFLGD
DQHYLCGSNNLFEPLLDEINSRSINCPSSANISVSRSNKVTPVDNKMHHIEAKCHNLVLE
FEVKTYSGNTTFSASVERVKVDAYYDAQRYSTGFLSSGDQNTSNEQLFLNHHIKEKIQDS
LPPFPFCISDCDSDLAGKDSTLGGISQFRLFESFGNCSCKLNVNPKGSNGLMALTSFVVN
FPPFILWFHYNLVDMLLYLFKHVNHSKINNQTKDVQSDMLCERTTISSSEVAKTDTTSIT
SAPPRTFLQGNLIFPQSRIIICFPPDYYGDSRSSSLLDKLIVLEHSTPLNPKEASDSFSF
PNVNSARDQPSMSSSSIHLSTQNLDVYLVESAKENGLDGGVCTPEKQFFSSVKIISVSGI
KKDSCSGITMLWQQGSLTGSWMVDRVWSLAVSRDQNRNKIIGKGSEFSSITDADDLEETH
CNIRQELILNSSFFLHIQLCCVWINLDNHDYKFLTCLLNNVIDGFSKATIGMDSNINTDI
MKKNIAATTTASQASVLVKCDVIDACIRLNETLEVSHLIQKELQGLWDCFRLKIDKFELL
SVSNIGESSGTNYLWINHREGDLWGSVFNEEKSPTVAHDKKYSQVIPDICLLTFRNSAMK
RGNGEGANALTFGLAGTAITNMWNPLLQQSYTSIIVRCGTIIGPGGRLDWISSILSYFNS
SDKERENLENDGTKYKVLFFLDLVDVALGYEPYATAHIVVGSKDPDIRHNCDSEPDIEKD
TAVTACLLAASSLSLYNHTNRDSTVDYNIHLKDVGFLISESHVSTSDVDGYSIGYVQRAG
YSKIAQVSILQAILRIRGLFWELEFSESHVSLESCRDTTSSLFRLIVQLQQLYAPDVEDS
LMHLQSRWNRMRDVSTSSLLSTSVQEEPTCGLLDGILENAFESNPTSDVCSMALVSREQH
KLEDILKSGASVDSAAADSSYSKGVGIFLDKPVMPQVIERYYPPDILPSAQLHSINHYPA
EHDKCTLDISTHRDTEYRQGGWYVDDGFMIVEDHISTMQKQPEGNSLLDEEFGCENISTA
DHSPPKGRILLKDMEASWCMYAGLDWAKSKGIDGRDRSTFLELSLVGLCLQYDIYPEGEI
NVSKLSLTVQDFNLYDRSDDAPWKMVLGNYHSKDHPRESYAKAFKLNLETVRPNPVTPLE
DCRLLLELLPLRLHLDQTQLIFLTNFFGNESFDDPSPSSPNILDGSDTSTSLSRRSGKQL
VVEEALLPFFQKCVVKPLIVCVDYIPRHFDPASLRRGNYAELLNLVPWKGIDLKLKQVCA
IGVYGWNNIFETVIGEWLEDIANNQVRELLKGLPPMKSLFAVSSGTKKLVCLPLKSYKKD
HKLLKGMQRGAMAFIKSISIEAVGLGVHLAAGVQEILLQTEYFLASSPSSVPLSEIKRKI
TSVRANQPENAQEGIQQAYESLSDGFGRTTSGLLGNPLKAYQRGAGAGSALAMAVRGAPA
AAIAPFSASARAVHSTLLGLRNSMDPEHKRESIEKYQGPSQS
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcggtgggacttctcgcggtcgagcgtgatcaagcgcgtgtgcaagttcctg
ctaaagaagaagcttggggaggtgattttgggcgacatcgacctcgatcagctcgatgtc
cagctcggcaccggcacaatccaactctccgacctcgcgctcaacgttgatttccttaac
cagaagattgctggtgcaccaattgtggttaaagaaggatcaataaagtctctatcgatt
aaagtcccctggaaactgaggaattgtgagatagaaattgatgagattgagcttgtgctt
ggaccatttaatgggagctgtgctactcaggctaatgctgacagttcattgccacatgat
tgtcaacatcatatgaatgacaatcctgataggattgagtgtgagattgctcaggattac
catggttctatccctctagacattcatgaaggagttaaaacaattgccaaagtagtgaaa
tggtttcttactagctttcatgtcagactaaatggggttatagttgcgtttgatcctcgg
tcacatctggatgaaagaagagacaaatcctgtaggcttctagttcttcgaattaaagag
accgagtttggaactcatctttcagaagattcaatgtctaagttaacaaacttcatgaaa
ttccaaaaagctaatgttgagtttcttgaaatggatgatatagatgaaggcttggaggtt
gacaatgttacagggagaggccttaatggaaggctcttgaatcatggtaccacttcaatt
ttgactggggcagatggtgggttctcagtgacattaaacttgagcattccatggaagaat
ggctgtttggatgtgagtaaagttgatgcggaggtttcaattgacccaatagagttaagg
atccaacccagcagtattaattgggtgatagctatatggaattctctcgagaacaccaaa
gcatctgaatgtgcacactatcataaagcttcaaattcatttaactccacttatagaagc
catacagctatgacaaatactatctatttagatgttgatgctgatacactcacgaggggt
agtgaactaagtagtgtgttttctgcaatcactccagaaacaattcctgatgctttgctt
atgaggacaaacttcattcatgattgggttccacaacatctttatcaagaagatcctagt
agtatggtgccagacctaagtgcaagcattgatcaattctttgaatgtttcgatgaaata
agttctcaagggtactcaagtaccggaagtatatggaactggacacgttctgttttcaat
gcaatatctgttgcatctaatctcgcttctgggatgggcgatgttgctaaagaacaacat
gtggagactagtttacgagctgcaatagctggtatcagtgtcattgttttccttggtgat
gatcagcattatttatgtggttcaaacaatttatttgagccattattggatgagataaat
tctaggtcaataaactgtccttcgtcggcaaatatttctgtttccagatcaaacaaagtc
actcctgttgataacaagatgcatcacattgaagcgaagtgtcataatttagttctagaa
tttgaggtgaagacttattctggaaatactacatttagtgcgtcagtggaacgtgtcaaa
gttgatgcatactatgatgctcaaagatattccacaggctttctgtcaagtggtgaccag
aatacctccaatgagcaattgtttctaaaccaccatataaaagaaaaaatccaagattct
cttcctccatttcctttttgtatatcagattgtgattcagatttggctgggaaggatagt
accttgggtggcataagtcagtttaggttgtttgagtcatttggcaattgcagctgtaag
ttgaatgtcaacccaaaaggctcaaatggcttgatggcgctgacatcctttgttgtcaat
ttcccacctttcattttgtggtttcactataatctggttgacatgcttctgtatctcttt
aaacatgtaaatcactcaaagataaacaatcaaaccaaagatgttcaatctgatatgcta
tgtgaaaggactactatctcatcttctgaagttgctaaaactgacaccacttctattaca
agtgcgcccccaagaacatttcttcaaggaaatttaatttttcctcagtctaggataatc
atttgtttcccgccagactattatggagattctcggagctcttcccttttggataaactc
attgtacttgagcattctacacctttgaaccctaaagaagcttcagattccttttctttt
ccaaatgtaaattctgcaagggatcaaccatccatgtcttccagttcaattcacttgagt
acacaaaacttggatgtttacttggttgaatctgcaaaggaaaatggtttagatggtgga
gtttgcactccagaaaaacagtttttttcttctgtgaagatcatatcagttagcgggata
aaaaaggattcatgttctggaattaccatgctttggcaacagggttcactgactggtagt
tggatggtagatcgtgtttggagtttggctgtatcacgtgatcaaaacagaaataaaatt
attggaaaaggatcagagttctcctctataactgatgcagatgaccttgaggagacacac
tgtaatattcgccaggagttgattcttaattcttccttttttttgcatattcagttgtgt
tgtgtatggatcaatcttgataaccatgattataaatttttgacttgtttgctaaataat
gtcattgatggattttccaaggcaacaattgggatggacagtaatataaacactgatata
atgaagaaaaatatagcagcaactaccaccgcgtcacaagcatctgttcttgtgaagtgt
gatgtcatagatgcttgtattagattaaatgaaacactcgaggttagtcacttaatacaa
aaggaactacagggattatgggattgctttagactgaaaattgacaagtttgagttgcta
tctgtctctaatattggtgaaagttctggcacaaattatttatggatcaatcacagagaa
ggtgatttgtggggttctgtctttaatgaagaaaaatctcctactgttgcacatgataaa
aaatattctcaagttataccagatatatgtctattaacctttcggaattctgcaatgaaa
cggggtaatggtgaaggtgctaatgcattgacttttggtcttgctggtactgctataact
aacatgtggaatccactgttacaacaaagttacacatccattattgttcgatgtgggaca
attattggacctggtggtcggttagattggattagttctatattatcatatttcaattca
tctgataaagagagagagaatttggagaatgatggaacgaaatataaagtgctatttttc
ttggatttggtggatgttgctttaggatatgaaccctacgctacagcacacatcgttgtt
ggcagtaaagatcctgacatcaggcataattgtgattcggaacctgacatagagaaagac
actgcagtcacagcatgccttttggctgcttcatccttgagcctctataatcatactaac
cgagattcaaccgttgattacaatattcatctgaaggatgtaggctttcttatttctgaa
tcacatgtatccacatcagatgttgatggttattctataggctatgttcaaagggcggga
tattcaaaaattgctcaggtttccattctgcaggctatattaagaattagagggctcttc
tgggaacttgaattttcagaatcacatgtcagtctagaatcttgtagggatacaacatct
agccttttccgtttgattgttcagcttcagcagctttatgcacctgatgttgaagactct
ttgatgcacttgcagtctcggtggaatcgaatgagagatgtctccaccagttctttgctg
tcaactagtgttcaagaggaacctacatgtgggttattggatggcatcctcgagaatgct
tttgaatccaatccgacatctgatgtttgcagcatggctcttgtttcacgtgaacagcac
aagctagaggacatactaaagtctggagcctctgtggattctgctgctgctgattcatct
tatagtaaaggagtaggtatatttttagacaaacctgttatgcctcaggtaattgagagg
tactatccacctgacattcttccatctgcccagttgcactccatcaatcattatccagct
gaacatgacaaatgcacactggatatttcaactcatagagacactgaatatagacaaggt
ggatggtatgttgatgatggctttatgattgttgaagaccatatttcaacaatgcaaaaa
cagccggaaggaaattctcttttagatgaagaatttggatgtgaaaatatttccactgct
gatcatagcccaccaaaagggagaatacttcttaaagatatggaagcaagttggtgcatg
tatgctggacttgactgggctaaatcaaagggaattgatggaagagataggagcacattc
ttggagcttagtttggtagggttgtgtcttcaatacgacatatatcctgaaggtgaaatt
aatgtatcaaagctctctcttacagtacaagattttaatctgtatgacagaagcgatgat
gcaccttggaagatggttttaggcaactatcattcaaaagaccatccaagagaatcctat
gctaaagcattcaaattgaatttggaaactgtaaggcccaacccagtcacacctttggag
gattgcaggttacttcttgagcttctacctcttcggttgcatcttgatcaaacacaacta
atttttctcaccaatttttttgggaatgagtcctttgatgacccttctcctagttcacct
aatattttggatgggtctgatacgtcaacttcattgagccgaaggtctggaaagcaacta
gtagtggaggaggctctacttccgttttttcagaaatgtgttgttaagcccctgattgta
tgtgttgattatatccctcgtcattttgacccagcttcactaagaagaggaaactatgct
gaacttctcaatttagttccgtggaagggaattgatttgaagcttaaacaagtttgtgcc
attggggtttatgggtggaacaatatttttgaaactgtcattggggagtggttggaagat
attgctaacaatcaggtacgggagctgttgaaagggcttccacccatgaagtctttgttt
gccgtcagttctggtactaaaaagttggtttgcttgccattaaaaagctataagaaagat
cataagttgctgaagggaatgcagagaggtgcaatggccttcataaagagtatttcaatc
gaagccgttggcttgggggttcatttagctgctggagtccaggaaatcttgctccaaact
gaatacttccttgcaagtagcccttcgtctgtaccattgtctgagataaagaggaaaata
acaagtgtaagagctaatcaaccagaaaatgcacaggaaggtatccaacaggcttatgag
agtctaagtgatggctttggtagaactacctcaggtttgctcgggaatcctttaaaggct
tatcagcgtggtgctggtgctggttctgctcttgcaatggctgttcgaggagctcctgct
gctgctatagctcctttttcagcttctgctcgtgctgttcacagcaccctgcttggattg
aggaatagcatggatcccgaacacaaaagggaatcaatcgagaaataccaggggccttct
cagtcctaa
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