Zingiber officinale (ginger): 121970253
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Entry
121970253 CDS
T08725
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00450
Selenocompound metabolism
zof00970
Aminoacyl-tRNA biosynthesis
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
121970253
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121970253
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
121970253
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
121970253
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
121970253
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class I (U)
121970253
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
121970253
Prokaryotic type
Other AARSs
121970253
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Motif
Other DBs
NCBI-GeneID:
121970253
NCBI-ProteinID:
XP_042376778
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Position
4A:95711667..95757450
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AA seq
612 aa
AA seq
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MAAGRALLWSQTGIAAVAPISSSMRFRAKRLASSFPFLVCRCPSSLVSTSVRCYSRPQSE
VVSGEVKTSGKEETFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLGKRVVFITGTD
EHGEKIAAAAEASGSSPSEHCDTISQSYKILWKELDISYDKFIRTTDQKHEAIVKEFYSR
VLNNGDIYRADYEGLYCVNCEEYKDEKELLENNCCPMHLKPCVPRKEDNYFFALSKYQKA
LEDYISSNPDFLKPSFRLNEVQGWITNGLKDFSISRSSVEWGIPVPNDKTQTIYVWFDAL
LGYISALSEDSEQSNLQQAVNSGWPASLHLIGKDILRFHAVYWPAMLLSAGLSIPNMVFG
HGFLTKDGMKMGKSLGNTLEPMDLVQKFGADAVRYFFLREVEFGNDGDYSEERFVNIVNA
HLANTIGNLLNRTLGLLKKNCQSTLPYDSIFAVEGNSFKDSVSQLVEKAKYHYENLSLSS
ACESILEIGNVGNLYMDKNAPWSRFKQGGASSEMAAKDLVIILEAMRIIAAALSPVTPSL
CFRIYSQLGFSKEQFEAVTWDDTRWGELRAGRVMAEAKPVFAKMENNQDGDKKGSSKEGK
NKKILRQGLVEA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggccgtgctctcctctggtcccaaactggaatcgctgccgttgcgccgatt
tcatcctctatgagattccgggccaagagactcgcttcttcattccctttcctcgtctgc
cggtgcccctcgtccctcgtatcgacttccgttcgctgctacagtcgtccgcagagcgag
gttgtgtctggagaagtcaagactagcggaaaggaggaaacttttgttctcaccactcct
ctttactacgtcaacgcgccgcctcatatgggaagcgcctatactaccatagctgctgat
gccattgctagatttcagaggctgctaggtaagagagttgtattcatcacagggacagat
gagcatggagagaaaattgctgctgctgcagaagctagtggaagtagccctagtgaacac
tgtgatactatttcacagtcttacaagattctatggaaagagcttgatatttcatatgac
aaattcatacgtactactgatcagaagcatgaagcaatagtcaaagagttttattccaga
gtgcttaacaatggtgacatatatagagctgattatgaagggctttactgtgtgaactgc
gaagagtacaaggatgagaaagaattgcttgagaataattgttgcccaatgcacctaaag
ccttgtgttccgaggaaggaagataactacttctttgcattatcaaaatatcagaaggca
ctggaagactatatatcatctaaccctgattttctgaagccttctttccgtttgaatgag
gtgcaaggttggattacaaatggactaaaagatttctctatatcccgttcatctgtagag
tggggtatacctgtgccaaatgacaagacacaaactatttatgtctggtttgatgctctg
ttggggtatatttctgcattatcagaggacagtgagcagtcaaacttacaacaagctgtt
aattctggttggcctgcttcgctgcacttgataggaaaggatatattgcggttccatgcg
gtctactggccagctatgctactatcagcaggattaagtattccaaacatggtatttggt
catggattcttaacaaaggatggtatgaagatggggaaatcattaggaaatacattggaa
ccgatggatctagtgcaaaaatttggagcagatgctgttcgatacttcttcctgcgggaa
gtggaatttggtaatgatggagattattcagaggagcggttcgtcaacattgtaaatgca
catcttgcaaatacaatcggaaaccttctcaaccgtactcttggactattgaagaaaaat
tgccagtcaactttgccttatgattctatttttgctgtagaagggaattcatttaaggat
tctgtgagccaattggtggagaaggcaaagtaccattatgaaaacctttcattgtcatca
gcttgtgaatctatcttagaaatcggtaatgttggtaatctttacatggataaaaatgct
ccgtggtctcgttttaagcaaggaggtgctagttctgaaatggccgcaaaggaccttgtc
attatactggaggcaatgagaataatcgcggctgctttatctccggtcactccaagcctg
tgttttagaatatacagtcagcttggattttcgaaagaacaatttgaagctgtaacttgg
gatgatactcgatggggcgagctcagggcaggccgagtaatggcagaagcaaagccagta
tttgcaaagatggaaaataaccaggacggagataaaaagggtagttcaaaagaaggtaaa
aataagaagattttgcgacaagggcttgttgaggcttga
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