Zingiber officinale (ginger): 121970304
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Entry
121970304 CDS
T08725
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic-like
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121970304
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
121970304
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
121970304
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
121970304
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class II (U)
121970304
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121970304
Prokaryotic type
121970304
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
Motif
Other DBs
NCBI-GeneID:
121970304
NCBI-ProteinID:
XP_042376847
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All DBs
Position
4A:98648786..98661901
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AA seq
597 aa
AA seq
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MPTVSVGRDRLFAALGETYTQEEFEELCFKFGIELDDVTTEKAIIRKEKHLEEEEEAEAG
DEDEEVIYKIEVAANRYDLLCLEGIARALRIFIEKEANPLYTVSDVSSKSILKMHVKPET
SLIRPFVVCAILRGITFDEARYNSFIELQDKLHQNICRRRTLVAIGTHDLDTIQGPFSYE
ALPPQEINFVPLKQVKSFRADDLLEYYKSDMKLKKFLHIIENSPVYPVIYDNNRTVLSLP
PIINGAHSAINLKTRNVFIECTATDLTKAKIVLNTMVTMFSEYCEKKFEVEPVEVIYSDG
KSMICPDLSVSRMEVPLSEIIDPIGISLDVSEVVTLLNKMQLEAAHSSLATGDFNIVVSV
PPTRSDILHARDVMEDVAIAYGYNNIPKSKPKCMTTGGRQPLNRFSDKVRAEVARAGYME
VLTWVLCSHEENFSMLRRKDDGDKAVIIANPRSADFEVVRTSLMSCLLKTLKHNIDHPRP
IKIFEVGDVVVLGGDRDVGASNNRRLAALYCNVSSGFEEILGLVERIMKVVRAPHINVPD
NYHKPSDEPEYFPNRQCSIIFNGKQIGNFGIVHPEVLKKFGIPDPCSFMEIDIQSLL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggtgagcgtcgggagggaccgcctttttgctgccctcggcgaaacttatacg
caggaggagttcgaggaactatgcttcaaattcggcatcgagctcgatgatgttactacg
gagaaagccattattcggaaagagaagcatcttgaagaagaagaagaggcagaagctggt
gacgaggacgaggaagtcatttataagatcgaggtcgcagccaatagatatgatttgctc
tgtcttgaaggaattgctcgagctctcagaattttcattgaaaaggaagcaaaccctttg
tatacagtctctgatgtatcatctaaatcaatactcaaaatgcatgtcaaacctgagacc
tcattgatccggccttttgttgtctgtgccattctaagaggaataacctttgatgaagca
agatacaacagcttcattgagctgcaagataaattacaccaaaatatatgtaggcgaaga
accttagttgctattgggacacatgatttggatacaatacagggtcctttttcatatgag
gcattaccacctcaagagattaattttgtgcctttaaagcaggtgaaaagtttcagggct
gatgatctattggaatattacaaatcagatatgaagcttaagaagttcttgcacataatt
gagaactctcctgtgtacccagtgatctatgacaacaatagaactgttctctcacttcca
ccaattattaacggtgcacattcagcaatcaacctaaagacaagaaatgtgttcattgaa
tgtactgccactgatttgacaaaagctaagattgttttgaatacaatggtgactatgttt
tcagaatattgcgaaaagaaatttgaggtggaaccagttgaggtaatttattctgatggg
aaatctatgatctgtcctgatctttcagtttctaggatggaagtccctttatctgagata
attgatccaattggcatctctcttgatgtctctgaggttgtaacattattaaataaaatg
caactggaagcagctcattcatcattggccactggagattttaatattgttgtttctgta
cctcccactcgcagcgacattctacatgcccgtgatgtgatggaagatgtagctattgca
tatggatacaacaatatcccaaaatcaaagcctaaatgcatgactactggagggagacaa
cctttgaaccgcttttctgataaagtcagagctgaggttgcaagggcaggttacatggaa
gtcttaacatgggttttatgctcacatgaagagaatttttcgatgctaaggcgaaaggat
gatggagataaagctgttatcatagcaaatcctcgttctgctgactttgaggtggttaga
accagtctgatgtcatgcttattgaaaaccctaaagcacaatattgaccaccccagacct
ataaagatatttgaagttggtgatgttgttgtgttgggtggcgatcgggatgtcggtgca
tcaaacaatcgtcgacttgcagcattatattgtaatgtttcctcaggatttgaggaaatt
ttgggattggtggaaagaataatgaaagttgtaagagcacctcacattaatgtccctgat
aattatcataagccttcagatgagccggaatattttcctaatagacaatgcagcatcata
tttaatgggaaacaaattgggaactttggaattgttcatcccgaggttttgaagaaattt
ggtatccctgatccttgttctttcatggagatcgacatccagtcgttgttgtag
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