Zingiber officinale (ginger): 121970344
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Entry
121970344 CDS
T08725
Name
(RefSeq) 26S proteasome regulatory subunit 4 homolog B-like
KO
K03062
26S proteasome regulatory subunit T2
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121970344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zof03051
]
121970344
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121970344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_22
DUF815
nSTAND3
AAA_16
AAA_2
AAA_5
RuvB_N
AAA_lid_PRS2_C
ATPase
TIP49
AAA_3
RNA_helicase
AAA_28
NB-ARC
NPHP3_N
AAA_24
AAA_14
AAA_25
Sigma54_activat
TsaE
Mg_chelatase
IstB_IS21
Parvo_NS1
AAA_7
NACHT
MCM
Motif
Other DBs
NCBI-GeneID:
121970344
NCBI-ProteinID:
XP_042376930
LinkDB
All DBs
Position
4A:complement(100648652..100654067)
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AA seq
445 aa
AA seq
DB search
MGQGTPGGMGWQELPGDRKQDGDNKGKKFERAAPPSRVGRKKRKQKGPEASGRIPAVTPL
SKCRLRLLKLERIKDYLLMDEEFVANQERLRPHEEKNEEDRSKVDDLRGSPMSVGNIKEL
MDENHAIVSSSVGPEYYVGILTLVDKDQLEPGCAILMHNKVLSVVGILQDEVNPMVSVMK
VEKAPLESYVDIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLL
AKAVANSTSATFLRVVGSELIQKYLGDGPKLLRELFRVADELSPSIVFIDEIDAVGTKRY
DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNKIESLDPALLRPGRIDRKIEFPL
PDIKTKRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVT
HVDFKKAKEKIMYKKKQGVPEGLYM
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggggcagggtactcctggcggcatggggtggcaggagctccccggcgaccgcaagcag
gacggcgacaacaaggggaagaagttcgagcgggcggctccgccgtcacgggtcggccgg
aagaagcgcaagcagaagggacctgaggcttccggccgcattcccgccgtcaccccgctt
tccaagtgccgccttcgcctcctcaagctggagcgcatcaaggactacctcctcatggac
gaggagttcgtcgctaaccaggagcgcctgcgcccccatgaggagaagaatgaggaggac
cgatccaaggtcgacgacctccgtggttcgccgatgagcgtcgggaacattaaggagctc
atggacgagaaccatgccatcgtgtcttcctcggttggtccggagtactatgttggtata
ctgacgcttgttgacaaagatcagttggaaccgggctgcgcaatcctcatgcacaacaag
gttctatctgttgttggaatacttcaggatgaagtgaatcctatggtttctgttatgaaa
gttgaaaaggctcctttggagtcttatgttgatattggtggcttagatgctcaaatccaa
gaaattaaagaagctgttgaacttccacttactcatcctgagttatatgaggatattgga
attaggcctcccaagggagtaatattatacggtgaacctggaactggtaaaactttactt
gccaaggctgtagctaattcaacttctgcaacgttcttgcgtgttgttggaagtgagttg
atccagaaatacttgggtgatggacctaagctgctgagagaattgtttagagtggcagat
gaactttctccttcaattgtatttattgatgagatagatgcagttggcaccaaaagatat
gatgctcattcaggtggtgaacgtgaaatacagagaaccatgttggagttgctgaaccag
ttagatggtttcgattcaaggggagatgttaaagttattcttgcaaccaacaaaattgaa
agccttgatccagccttgcttcggcctggccgtattgacagaaagattgaattccctctg
cctgacattaagacaaaaagacggatttttcagattcatacatccagaatgactctggct
gatgatgtcaacctagaagagtttgtcatgaccaaggatgagttttctggagctgatatc
aaggcaatctgtactgaagctggcctgcttgctttgagagagcgtaggatgaaggtaact
catgtagactttaaaaaggccaaagaaaaaattatgtataagaagaagcaaggagtgcct
gagggactctacatgtga
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