Zingiber officinale (ginger): 121970361
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Entry
121970361 CDS
T08725
Name
(RefSeq) poly(U)-specific endoribonuclease-like isoform X1
KO
K14648
poly(U)-specific endoribonuclease [EC:3.1.-.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121970361
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Gene cluster
GFIT
Motif
Pfam:
XendoU
EndoU_bacteria
Motif
Other DBs
NCBI-GeneID:
121970361
NCBI-ProteinID:
XP_042376979
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Position
1B:100725017..100728890
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AA seq
440 aa
AA seq
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MSATTSCLPLLSPIDLRPTQSTLSASLFPIQIHNRRKAAAMEGLVKGLLNVALDAIGGDD
GEDSRRQGEERSRSTWAQVVSSGDAEGEGDSGCRRNQSGARKASGEGNDGDWETVSGRRK
HPQEDSRKRPQKSWQVPAETWSTYKKHPDEQEYMAHTQHAANVEPTREELHDLSKACSRL
WELDLNRLVPGKDYEIECGRGKKVYQEEDMAQGSLFTWLSDSVLRQPTYSRFCSLLDNYN
PDERCREVVTSEEKHEQVAFIEEISRTAPIKYLYHYLVSKEIITENFEQFKRMMTSLWFD
LYGRGGVSGSSSAFEHVFVGEIKRKEEKEVSGFHNWTQFYLEEAKGTVNYHGYILPRRRG
ECPDSETQVLSIQFEWNGILKSVSTVLVGVSPEFEIALYTLCFFAGEEDNHVQLGPYFVN
IKCYRLGRDKIGSAFPIAEN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgacgacttcttgccttcctcttttatcaccaatcgatctccgccccactcaa
tccactctctccgcctctcttttcccgatccaaatccacaaccgaagaaaggcagcagcg
atggaaggcctcgtcaaaggcttgctgaacgtggccctggacgccattggcggcgacgac
ggcgaagactcgcggcgtcagggcgaggagcgctccagatccacttgggcccaggtggtc
tcctccggggatgcagagggtgagggcgactccggctgccgccgaaaccaatcgggcgcc
agaaaggcgagcggcgaaggaaatgatggagactgggagaccgtaagcggtaggaggaag
catccgcaggaggattcacggaagagacctcaaaagagttggcaggtaccagcagaaacc
tggagtacatacaaaaaacatcctgatgagcaagagtatatggctcatacccagcatgct
gcaaatgtggaaccaacaagagaggagcttcatgacctctcaaaagcatgcagtagattg
tgggaacttgatttaaatcgattggttcctggcaaagactacgagatcgagtgtggcaga
gggaaaaaagtctatcaagaagaagacatggcacaaggcagcctcttcacttggttgagt
gattcggtcctaagacaacccacttattctaggttttgttctcttcttgataactacaat
ccagatgaacggtgcagagaagtggtcacctcagaagagaagcatgagcaagttgcattt
attgaggaaattagcaggactgcaccaatcaagtatctttatcactatctagtttccaag
gaaattataactgaaaattttgagcagttcaagagaatgatgaccagcttatggttcgat
ttgtatggtcgaggtggagtttccggttcttcatcagccttcgaacatgtatttgttgga
gagatcaaaaggaaggaagagaaagaggtctctgggtttcacaactggactcagttttat
ttggaagaggctaaaggaacagtcaattaccatggttatattctaccaagaagacgcggt
gaatgtccagattccgagacccaagtgctatcaattcagttcgagtggaacggcattctg
aaatctgtctccactgttcttgttggagtgagcccagaatttgagattgctctttatact
ctctgcttctttgctggtgaagaagacaaccatgttcagctaggcccttattttgtcaat
ataaagtgctaccgactgggaagggacaagattggatctgcatttcccattgctgaaaat
taa
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