Zingiber officinale (ginger): 121970365
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Entry
121970365 CDS
T08725
Name
(RefSeq) calcium permeable stress-gated cation channel 1-like
KO
K21989
calcium permeable stress-gated cation channel
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121970365
Transporters [BR:
zof02000
]
Other transporters
Pores ion channels [TC:
1
]
121970365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
121970365
NCBI-ProteinID:
XP_042376981
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Position
4A:complement(101681934..101696055)
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AA seq
769 aa
AA seq
DB search
MATIADIGFAAGINFLTALAFLVAFAVLRIQPVNDRVYFSKWYLKGTRSSPPHGGAFVQK
FVNLNWRSYLRFLEWVPDALKMPEPELIDHAGLDSVVFLRIYLIGLKIFIPIAILAFGVL
VPVNWTSNGLKDSKSLEYSDVDKLSVSNISTGSQRFWTHLVMAYAFTFWTCYVLNKEYDS
IASMRLHFLASTKRRPDQFTVLVRNVPPDPDESVDELVEHFFLVNHPDQYLTHQVVYNAN
TLAKLVKEKEKMVNWQDFYQLRYERNPSTRPTRKTGFLGLCGDKVDAIEYYTSKIDKLSE
EEAAEREKIVKNPKFVMPVAFVSFRTRWGAAVCAQTQQTRNPTLWLTEWAPEPRDVYWHN
LAIPFVHVAIRRLIVTVAVFFLTFFFMIPITFVQTLANIEGIEKAAPFLKPLIEVPVIKS
FIQGFLPGIALKIFLIFLPTILMIMSKFEGLVSLSSLQRQSASKYYLFLLVNVFLGSIIL
GTAFQQLNSFIHQSATEIPKTIGVSIPQKATFFITFIMVDGWAGVAGEILRLKPLIIFHL
KNFFLVKTEKDREEAMDPGSIEFSTSEPQIQLYFLLGLVYSAITPFLLPFILVFFALAYV
VFRHQIINVYNQEYESAAAFWPDVHGRIIFALVTSQILLLGLLSTKKAAESTPFLIALPI
LTIWFHRFCKNRYEPAFVKYPLQEAMMKDTLEHAREPNLNLKAYLSNTYLHPVFKEDEES
DEIFASDEEKDYDNVLVPTKRQSRRNTPIPSKHGRSSPPSDIDIIPLHL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggccacaattgctgacatagggtttgcagcaggcattaacttcctcactgccttggca
ttcctcgtggcatttgctgttctaaggatccagccagtaaatgacagagtttatttttca
aaatggtatcttaaaggtacaagaagcagtccacctcatggcggagcatttgtgcaaaag
tttgtcaatttgaattggaggtcatacttgcgatttttggaatgggtgccggatgctctc
aagatgcctgaaccagagcttatagaccatgcaggacttgactctgtggtcttcttgcga
atatacttgattggacttaaaatctttattcccattgcaatcctggcatttggtgttctt
gtccctgtaaactggactagtaatggactaaaagattcaaagagtttagaatacagtgac
gttgacaaactatcagtatccaatatctctactgggtcacagaggttttggacccatttg
gtcatggcatatgcctttaccttttggacatgttatgttttgaacaaggagtatgacagt
attgcatcaatgaggttacattttcttgcatcaacgaaacgccgtcccgatcagttcact
gtcctcgttcggaatgtgccacctgatccagatgagtcagttgatgagcttgttgaacat
tttttccttgtcaatcatcctgatcaatatttaacccaccaggttgtgtataacgcaaac
acactggctaagctggttaaagagaaggaaaaaatggtgaattggcaagatttctatcaa
ttgagatatgaacgtaatccatcaacaagacctactcgcaagactggttttctgggactg
tgtggtgacaaggtggatgcgattgaatactacacatctaagattgataagctttctgag
gaagaagctgctgaacgtgagaagatagtaaagaatcccaagtttgtcatgccagttgca
tttgtttccttccgaacacggtggggagcagctgtttgtgcacagacacaacaaactaga
aacccaacattgtggttgactgaatgggctccagaaccacgtgatgtttactggcataac
ctagccattccttttgttcacgttgcaatcagacgattgatagtgactgttgctgtcttc
tttctaacattcttctttatgatcccaataacattcgttcagacccttgcaaacattgag
ggaattgagaaggcagctccatttttgaagccattaattgaagtgcctgtcattaaatca
tttatccaaggttttctcccaggaattgctctgaagatatttcttatatttctgccaaca
atattgatgatcatgtccaagtttgaaggacttgtatccctgtcctcccttcagcggcaa
tctgcatctaaatattacctctttctgctagtgaatgtattcttagggagtattattctt
ggaacagcttttcagcagctaaatagttttattcatcagtcagcaactgaaatcccgaag
actataggtgtatccataccacagaaagcaactttcttcatcacttttatcatggttgat
ggttgggctggagttgctggggagattcttagattgaagcctttaataatcttccacttg
aagaatttctttctagtaaagactgaaaaggacagagaagaggcaatggatccaggaagc
atcgagttttctacatctgagcctcagatacagctgtatttcttgcttggtcttgtgtac
tctgctatcacaccctttttacttccattcatactagtattttttgctctggcatatgtt
gtctttcgccatcagattattaatgtgtacaaccaagaatatgagagtgcagcagcattt
tggccagatgttcatggccgcattatctttgcactggtcacatctcagattcttctactt
ggactcctaagtacaaagaaagctgctgaatcaacacctttcctcattgcgcttcctata
ttgactatatggtttcatagattttgcaagaatcgttatgaacccgcttttgttaaatat
ccacttcaggaagcgatgatgaaagatacattagaacatgctcgggagccgaatttaaac
ttgaaagcatacttatcaaatacatacctacatccagtgttcaaagaagatgaggagagt
gatgaaatctttgcatctgacgaagagaaagattatgataacgtcctggtaccaactaag
cgccagtctcgtcgaaacaccccgatccccagcaaacatggccgatcatcgccaccttcc
gatatcgatatcatcccattacatttgtag
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