KEGG   Zingiber officinale (ginger): 121970551
Entry
121970551         CDS       T08725                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04144  Endocytosis
zof04145  Phagosome
zof04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:zof00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121970551
   04145 Phagosome
    121970551
   04148 Efferocytosis
    121970551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    121970551
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zof04147]
    121970551
   04031 GTP-binding proteins [BR:zof04031]
    121970551
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    121970551
Exosome [BR:zof04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121970551
  Exosomal proteins of other body fluids (saliva and urine)
   121970551
  Exosomal proteins of colorectal cancer cells
   121970551
  Exosomal proteins of bladder cancer cells
   121970551
GTP-binding proteins [BR:zof04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    121970551
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU RsgA_GTPase AAA_16 ATP_bind_1 cobW nSTAND3 Septin AAA_5 AAA_7 AAA_22 DAP3 AAA_24 PduV-EutP NTPase_1 MCM NACHT Sigma54_activat nSTAND1 G-alpha IIGP NB-ARC
Other DBs
NCBI-GeneID: 121970551
NCBI-ProteinID: XP_042377269
LinkDB
Position
4A:109680710..109688892
AA seq 212 aa
MANPSSAMSTRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFTQQYKATIGADFVTKEILVD
DRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVRRSFDTLDNWHDEFLNQASPS
DPSTFPFILLGNKIDLDGGNSRVVSEKKAIEWCASRGNIPYFETSAKEDYNVDDAFLRVA
QLALQHDRDQDIYFQTIPEPPSQSDQRSGCAC
NT seq 639 nt   +upstreamnt  +downstreamnt
atggcgaatccatcttcggccatgtcgaccaggaggcgaactttgctcaaggttatcgtt
ctcggcgacagcggtgttggaaagacgtcgctgatgaaccaatatgtgcacaaaaagttc
acgcagcagtataaggccaccattggcgctgattttgtcaccaaggaaattctagttgat
gacagactcgttaccttgcagatttgggatactgcaggacaagaaagattccagagtctt
ggtgttgcattctacagaggagctgactgctgcgtcttggtctatgatgttaatgtccga
agatcatttgacactcttgataattggcatgatgaatttcttaatcaggctagcccttca
gatccctcaacatttccgttcattttgcttggtaacaagatagatttagatggcggaaac
agtagagtggtctctgaaaagaaagcgatagagtggtgtgcttctaggggcaatatacct
tacttcgaaacctccgcaaaagaggattacaatgttgatgatgcttttcttcgtgttgct
caacttgcattgcaacatgatcgtgatcaggatatatacttccagaccattccagaacct
ccatcccaatccgaccaaaggagtggatgtgcttgttag

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