KEGG   Zingiber officinale (ginger): 121970643
Entry
121970643         CDS       T08725                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    121970643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zof03400]
    121970643
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     121970643
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_SCAP NBCH_WD40 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_IP5PC_F RAWUL ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 121970643
NCBI-ProteinID: XP_042377406
LinkDB
Position
4A:114082343..114091384
AA seq 760 aa
MHRVASAGNTSNSTRPRKEKRLTYVLNDADNTKHCAGVNCLAVLNSSTPGSCDYLFTGSR
DGTLKRWSLSKNDATYSATFESHVDWVNDAVMAGSNLVSCSSDTNLKIWNPLSDGVCTRT
LRQHSDYIICLAAAEKNSNIVASAGLGGEVFIWDIDAALHPIAKFVDPKEDEHSNGTVGP
PISSLRGISAGNNISFHNNQSGGYCPIAAKGHKESVYALAMNTSGTLLVSGGTEKVIRVW
DPRTGSKVLKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYAVHTDSV
WALASNPAFTHVYSGGRDQSLYLTDLSTRESLLLYTKEEHPILQMALQDDSIWIATTASS
VHRLPAEGQNPQKVLERGGCFLAGNLSFTRARASLEGSAPVPLYKEPSFTISGIQGIVKY
EILNNKRHVLTKDTAGSVKLWEITKGVVIEDYGKVSFDEKKEELFEMVSVPVWFTMDTRL
GSLSVHLDTPQSFSAEMYAMDLNMSGAPEDLKINLAQETLRGLLVYWMAKRRHKAGSHAS
SNGDVTSTNDVVKNHPHSKIVVDDGSDNYNFGILPSFEFSTVSPPSIVTEGSHGGPWRKK
ITDLDGTEDEKDLPWWCMECVLNGRLPPRENTKCSFHLQACEGSNMQIITQGKLSAPRIL
RINKVINYVLEKMVLDKPLEGGSSDGSSGLGLSTRQSQVSSIGDVSLRSGMKPWQKTKPS
MEILCNNQVLSPEMSLATVRAYIWKKPEDLILNYRVAQNK
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgcaccgtgtggccagtgcaggtaacacctccaattcaacacgccctcggaaggagaaa
cgcttgacatatgttctgaatgatgcagataacacaaagcattgtgcaggtgttaattgt
ttggctgtcctaaattctagtactcctggtagttgtgattatcttttcacggggagcaga
gatgggacattgaaaagatggtcattaagtaaaaatgatgctacctattcagctacattt
gagtcccatgtagattgggtcaatgatgcagttatggctggtagcaaccttgtttcctgt
tcttcagacaccaacctgaagatatggaatcccttgtctgatggtgtttgcacaagaact
cttcgtcaacattctgactatatcatttgtcttgctgcggctgagaaaaatagcaatata
gttgcctctgcggggcttggtggtgaggttttcatatgggacattgatgcagctctccat
ccaattgcaaagtttgttgatccgaaagaagacgaacattctaatgggacagtgggacct
cctatttcaagcctacggggtattagtgcgggaaacaacatatcttttcataacaatcaa
tctggtggatattgtccaattgctgccaaaggccataaggagtcagtttatgccttggca
atgaataccagtggaaccttgcttgtttctggtggaactgagaaggttatacgggtttgg
gatccaagaactggttcaaaagttctaaagcttagagggcataccgacaatatcagggct
ttgcttcttgattccacaggaagattctgcctatcaggttcatctgattcaatgatccgt
ctatgggatcttggtcagcaacgctgtgtgcattcttatgctgtccatactgattctgta
tgggctcttgccagcaacccagcattcacacatgtttacagtggtgggagagaccaatct
ttgtacctgacagacttgtctacaagagaaagccttttgctctacacaaaagaagaacac
cctattttacagatggccttacaggatgacagtatatggattgcgactacagcttcgtct
gtacataggttgccagctgaaggacaaaatccacaaaaagttttagaaagaggcggttgc
tttttagcgggaaatttgtctttcacaagggcaagagcttctttggaaggatcagccccc
gttcctttatacaaagaaccatctttcaccatttctggaatacaaggaattgtaaaatat
gaaatcttgaacaacaaaagacatgtgctgaccaaggatacagcaggttcagttaaactg
tgggagattaccaagggtgttgtgattgaggactatggcaaggtttcttttgatgaaaag
aaagaagagctatttgaaatggtgagtgtacctgtatggtttacaatggacacacgactt
ggaagtttgtctgtccatttggatactcctcaaagcttttctgctgagatgtatgccatg
gacttgaatatgtcaggagcaccagaagatctcaagataaacctagctcaggagacactc
cgtggtttgttggtttattggatggctaaaagaaggcataaagctgggtcacatgcttca
tctaatggagatgttacatctacaaatgatgttgtcaaaaatcacccacactcaaaaatt
gtagtggatgatggttcagacaactacaattttggtattctcccttcttttgaattttct
acagtttcacctccatcaatagttacagagggttcacatggaggtccatggagaaagaag
atcacagatttagatggaacagaagatgagaaggatcttccttggtggtgtatggaatgt
gttttaaatggccgattgcctccaagagaaaatacaaagtgtagttttcatttgcaagct
tgcgaaggttccaatatgcaaataataacacaaggcaaattgagtgctccacggatactg
aggattaacaaagtgataaattatgtactggaaaagatggttctcgacaaaccattggaa
ggtggaagctctgatggctcatctggtttgggattgagtacaagacagtctcaggtttct
tcaatcggagatgtctccctccgatcagggatgaaaccttggcaaaagacaaagccaagc
atggaaatcttgtgcaataaccaggtgctgtcacccgaaatgagtttggccacagttcga
gcatatatatggaagaagccagaagacttgatcttgaactacagagtggcgcagaacaaa
tag

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