Zingiber officinale (ginger): 121970760
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Entry
121970760 CDS
T08725
Name
(RefSeq) protein argonaute 16-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121970760
03036 Chromosome and associated proteins [BR:
zof03036
]
121970760
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121970760
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121970760
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121970760
microRNA pathway
RISC loading complex
121970760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
121970760
NCBI-ProteinID:
XP_042377619
LinkDB
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Position
4A:118870217..118883575
Genome browser
AA seq
902 aa
AA seq
DB search
MASQGGKVEGDGIFSSQKIADSACCTKSETSFQIRSPMSRPAYGTDGRVIQLLANHFNVK
FTRHDAVFYNYSITIKSNDKIDETIATSKSLGRKILDKLYQTYSSELNGKEFVYDGAKSL
FTVGPLPQNNFEFTVVLDNSSSRSASGNPGKGSPIEGDQKRLKHSYLTRTYNVEMKFATM
IPLETIAHALKGINSEHTHDALRVLDIILRQQHAKRGCLLIKQSFFDGNHANFVDLGGGV
TGCRGIHTSFRTTGAGLSLNIDVSTTLIMSPGPVLNFLLANQNVQNPLQIDWVKAKRMLK
NIRIKTEHNKKEFKITGISELPCNQQSFNMKVRNNDGESQMVEITVYDYFRESHNIELTW
SAYAPCLDVGKPTQPNYLPVELCHLIPLQCYTKALSSQQRASLVEKSRQKPQERISVVTN
ILKKNQYDEDPILRACGFYIDKQLTKLDGRVLHAPKLKIGNEEELVPQNGRWNFNRKRLL
RPVKIGQKDQYWAIVNFSARCDLSYLSRELLSCARNKGIHMERPYTIIEEDRQWLKLSPV
VRVERMFEKMMPHIPEKPKFLLCVLPEKKNSEIYGPWKKKNLVEMGIVTQCISPTKINDQ
YLTNVLLKINTKLGGINSLLAIEYPSIPLINKDVMMIFGMDVSHGSRHSDLPSVAAVVGS
RQWPLVSRYRASVTTQSSKLEMIDSLFKLGADGKDEGMIRELLIDFYNSTNGMKPTQIVI
FRDGVGESQFNQVLNVELTQFLKAFEHLGEPTPPKFTLIVAQKNHHTKLFLANGSENVPP
GTVVDTMVVHPRNYDFYMCPQAGMIGMSRPVHYNVLLDEIGFSPDDLQKFVHSLSYVYQR
STSAVSMVAPVCYAHLAASQMSQFIKLDAAEEPSSEASAGERMTFPQLPRLHENVRHTMF
FC
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaaggtggcaaagttgaaggagatggcatattttcttctcagaaaatagca
gacagtgcatgctgtacaaaatctgagacgagttttcaaatacgctccccaatgtctagg
cctgcttatggtactgatggacgagtaatccagctgcttgcaaaccatttcaatgttaaa
tttactcggcatgatgcagttttctataattactctatcactataaaatccaacgataag
attgatgaaactattgcaaccagtaaaagcttaggaagaaagatcttggacaagctatac
cagacttatagttctgaacttaatggcaaggaatttgtttatgatggtgcaaagagctta
ttcactgttggccctctaccacagaacaattttgaatttacagttgttcttgataattca
tcatccagatctgctagtggaaacccaggaaaagggagcccaattgaaggcgaccagaaa
cgattaaagcattcatatcttacaaggacatataatgttgaaatgaagtttgcaacaatg
attccgcttgaaactattgcacatgcgttaaaaggcatcaactcagagcacactcatgat
gctcttcgagtacttgacatcattttaaggcaacaacatgcaaaaaggggttgcctcctt
atcaagcagtctttttttgatggtaaccatgcaaactttgtagatttaggtggtggagtt
actggttgccgtggaatacacaccagcttccgcaccacgggagctggtctatcattgaac
attgatgtatctaccactttgattatgagccctggtcctgtcttgaactttttgctggct
aatcaaaatgttcagaatcctcttcaaattgactgggtcaaggccaaaaggatgctgaaa
aacattagaattaaaactgaacacaacaagaaggaattcaagataactgggataagtgaa
ttgccttgcaaccagcagtcatttaacatgaaagtaagaaacaatgatggcgaatctcag
atggttgagatcacagtgtatgattattttcgagagagccataatattgagttaacatgg
tcagcctatgcaccatgccttgatgtgggcaaaccaacacaacctaattatctaccagtt
gagctttgccacctaattcctttacaatgctataccaaggcattgtcttctcaacaaagg
gcttcactagttgaaaagtccaggcagaaaccacaggaaagaatcagtgtggtgacaaat
attctaaagaaaaatcagtatgatgaggatccaattcttagagcttgtggtttttacata
gataagcaactgacaaagttggatggtcgtgttcttcatgcaccaaagctgaagattggt
aatgaggaagaacttgtgcctcaaaatggacgttggaactttaaccgaaagagactattg
agacctgtcaaaataggtcaaaaggaccagtattgggctattgtcaatttttctgctcgt
tgtgatttgagttacctatcaagggagcttcttagctgtgcaagaaacaaaggaattcat
atggagcggccatacaccattattgaagaggatcgacaatggttgaaattgagtcctgtt
gtaagagtggaacggatgtttgagaagatgatgccacatattccagagaaaccaaaattt
cttctttgtgtcttgcctgagaaaaaaaattctgaaatatatggaccatggaagaagaag
aatcttgtagaaatgggtattgttactcaatgcatctctcctaccaagatcaatgatcag
tatctaaccaatgtcctccttaaaataaatactaagcttggtggcatcaattctctactc
gctatcgagtatccaagcatacccctaatcaacaaggatgttatgatgattttcggaatg
gatgtttctcacggttctcgtcattctgatttgccatcagttgcagcggtagttggttct
agacagtggcctttggtatcaagatacagagcatctgtgacaacgcaatctagtaaattg
gaaatgattgattctttatttaagcttggagcagatggaaaagatgagggaatgatcaga
gagctgttgattgacttctacaactctactaatggcatgaaacctactcaaatcgtcatt
ttcagggatggtgttggcgagtcccaatttaatcaagttctgaatgtggagctaactcaa
ttcctcaaggcattcgagcatctcggtgaacctacacctcctaagttcactctcattgtg
gcacagaaaaaccatcatactaagctttttcttgctaacggctccgagaatgtcccgcct
ggaacagttgttgacacaatggtggttcacccaaggaactacgacttctatatgtgccct
caggctggaatgattggaatgtcaaggcccgtccattacaatgtattgcttgacgagatt
gggttctcccctgacgatctacagaaatttgttcattcactttcttatgtctaccagagg
agcaccagtgcagtatcgatggtggctcctgtttgctatgcacatttggcggcttcgcaa
atgtcacagtttatcaagttagatgctgcagaagaaccttcctctgaggcatcagctgga
gaaagaatgacatttccgcagctcccaagactgcatgagaacgtccgccacactatgttc
ttttgctga
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