KEGG   Zingiber officinale (ginger): 121970781
Entry
121970781         CDS       T08725                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    121970781
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     121970781
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_NOL10_N EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_TEP1_2nd DSE1_N Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_DCAF12 TRM82_WD Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_DCAF4 WD40_RFWD3 MIOS_WD40 Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_SPT8 PAC11 Beta-prop_WDR11_1st Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 121970781
NCBI-ProteinID: XP_042377668
LinkDB
Position
4A:complement(119935716..119939403)
AA seq 514 aa
MENRCRPSSFFGDLRSRELNGLRVRKRSHLGDLSSDASGAGAGVLAIEHDGEPSPPTAVS
FCKSSRNPHLLAVSDEEGYISFYDTRRSLPSYSSCWEGAGQARVCNWIAHSNAIFDICWN
KEDNQILTASGDQHIKIWNAEKRTCTGSLAGHTGSVKTVCSHSSNPDLVVSGSRDGSFAL
WDLRCSFSSTNRFGETCLSPISLVNDAHALTQRKRGRRGKADSKSITSVLYLKDGISIAT
AGAVNSVVKFWDTRNLKTSIIQTCPAAEPSTKSEKIQHGITSLSQDSYGVSLAASCRDNR
IYLYDVLKLDRGPIKIFSGSKIGSFFVKSVISLDGAHILGGSSDDNAYIWQVRRPESAPT
ILKGHQGEVTSVDWCSSELGKVVTSSDDFMVRVWKMNKDGCLNTRSPAAIRKRIIAPSVE
PRRLILDEPPTCSASMKDNFQAMEATVHEPSSPAQCKVVEFRTPESGRKRSSSFLMDGKE
MQESLEAISGSPSSVLSPPPSTKRRTILDYYHSV
NT seq 1545 nt   +upstreamnt  +downstreamnt
atggagaatcggtgtcgcccttcttccttcttcggcgatctgcgttccagagagttaaat
ggcctaagagttcgtaaaaggtcgcatctcggggacctttcgtcggatgccagcggagct
ggcgcaggagtgctcgccatcgagcacgatggcgagccctcgcctcccacagccgtctcc
ttctgcaagagtagtagaaatccccacctccttgcggtgtctgatgaagaaggatacatc
agcttctatgacacgcgccgcagcttgccgtcctattcatcttgctgggaaggagcagga
caagctagggtttgcaattggattgcacatagcaatgctatatttgacatatgctggaac
aaggaagataatcagattttaactgcttcaggtgatcaacatatcaagatttggaatgct
gaaaagagaacatgcactgggagcttggcagggcatacaggcagcgttaaaacagtttgc
tctcactcatcaaatcctgaccttgttgtttctggttcaagagatggatcttttgctctt
tgggatctaagatgcagttttagttccacaaatcgctttggggaaacatgtttatcgcct
atttcgcttgtcaatgatgcccatgcactcacccaaagaaagaggggtcggcgaggaaag
gctgattctaagagcatcacttcagttctttatctcaaagatgggatttccattgccaca
gctggagcagtaaacagtgttgtgaagttctgggatacacgcaatctgaaaacatctata
attcaaacatgccctgctgctgagccatcaacaaaatcagaaaagattcaacatggaatt
actagcctttcgcaagattcctatggtgtttctcttgcagcttcctgcagggataacagg
atttatctatatgatgtgctgaaacttgatagaggtcccataaagattttttctggaagt
aaaattgggtcattcttcgtgaagtctgttattagccttgatggtgctcacattcttggg
ggttccagtgacgacaatgcttacatatggcaggtgaggagaccagaaagtgcaccaact
attctgaaaggtcatcaaggagaagttacttctgtcgattggtgctcatccgaacttgga
aaagtagtcacttcttcagatgactttatggtgcgtgtttggaaaatgaataaggatggt
tgcttaaatacaagatctccagcagcaattaggaagcggataattgctccttcagttgag
cccagaaggctgatattagatgagcctcctacatgttcagcttccatgaaagataatttc
caagctatggaagcaacagtacatgagccatcctcgcctgctcaatgcaaagttgttgag
ttcagaacacctgaatcaggaagaaagagaagttcttcatttcttatggatggaaaagag
atgcaggaaagtcttgaagctatttctggtagcccttcttctgttttgagtcctcctccc
tctactaaaaggagaactatcctggactattatcattctgtttga

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