Zingiber officinale (ginger): 121970786
Help
Entry
121970786 CDS
T08725
Name
(RefSeq) myosin-17-like
KO
K10357
myosin V
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121970786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121970786
04131 Membrane trafficking [BR:
zof04131
]
121970786
03029 Mitochondrial biogenesis [BR:
zof03029
]
121970786
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
121970786
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121970786
mRNA cycle factors
P-body specific factors
121970786
Membrane trafficking [BR:
zof04131
]
Others
Actin-binding proteins
Myosins
121970786
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121970786
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121970786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
nSTAND3
AAA_22
Zeta_toxin
Flp1_like
CbiA
Motif
Other DBs
NCBI-GeneID:
121970786
NCBI-ProteinID:
XP_042377682
LinkDB
All DBs
Position
1B:104880218..104912178
Genome browser
AA seq
1525 aa
AA seq
DB search
MASPDNIIVGSHVWIEDPVVAWVDGEVFKIRGHQVHVRTTNGKMVVANLLKVFPKDIEAP
PGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQY
KGATFRELSPHAFAVADVAYRAMINEGKNNSILVSGESGAGKTETTKLLMRYLAYLGGRS
GIEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNRRISGAAIRTYLLE
RSRVCQINDPERNYHCFYLLCAAPHEDIKKYKLGSPNSFHYLNQSKCIKLDGVDDAEEYI
AIRRAMGIVGISEQEQEAIFRVVAAILHLGNVNFAKGQDIDSSVIKDEKSRFHLNMTAQL
LMCDAQGLENALIERVMVTPEEIITRTLVPASAIVSRDGLAKTIYSRLFDWLVEKINVSI
GQDPDSKHLIGILDIYGFESFKCNSFEQFCINFANEKLQQHFNQHVFKMEQEEYAMEEID
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYHTFKSNQRFAKPKL
SRTDFTICHYAGEVTYQANHFLDKNKDYVVSEHQDLLNASSCPFVSGLFPPLPEDSSRSS
KFSSMGSQFKLQLQALMETLSSMQPHYIRCVKPNNVLKPAIFENFNVIQQLRCGGVFEAI
NISCAGYPTRRTFYEFLHRFALLAPEFMEENYDDKIVCQKILDKMRLKSYQLGKSKVFLR
AGQMAELDARRAEVLGRAARTIQRQIRTYIARKEFLLLREASIQFQTFCRGWLACKLFVQ
MRHEAAALKIQKNYHCYIARKSYLALEMSAIVLQTGLRAMFAHNVFRFKKQTKAAICIQC
RWHSHRDYSYYKRLQKATLTFQCSWRQKLARRELRKLRMAARETGALKEAKDKLAKRVEE
LTWRLQLEKRLRTDLEESKAHEVHKFQTMLSEMQLQVEETKSMLIREHVAARKALEEAPP
VIKETTILVQDMEKINSLTAQVEQLKALLQTQKLESDTAKKAYSEAQERNDELIKKVENA
ERQVHKFQDTIRRLGEEVSNLASENQVLRQQALSISPTSRVLTVHPKATIFPRTPENNNV
LSGETKPSLDWSPSLPNPKNLEIDEKPQKSLNEKQQESQNLLLKCISEELGFCKGRPVAA
CLIYKCLLQWRSFEVERTSIFDQIIQAIGSKLEDNTNVLSYWLSNTSTLLLLLQRTLKAS
SLGSFTPQRRRTSASVFGRMPQGIRASPRSAGTPFLNGRMVGGSNDLHQVEAKYPALLFK
QQLTAFVEKIYGMIRDNLKKEISPVLSLCIQAPRTSRARIVKGTRSPANAVAQQALMEHW
HSIVKSLASYMKPLKANYAPPFLVQKLFTQIFSSINVQLFNSLLLRRECCSFSNGEYVKA
GLAELEHWCNEATEEYAGSSWDELKHIRQAVGFLVLHQKPKKTLKEITKDLCPVLSIQQL
YRISTMYWDDKYGTQSVTSEIISSMRLVMTEGSNNSSNNSFLLDDDSSIPFLVDDISKSM
TEIDIADIDPPPFLCQSSGFAFLAQ
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccagacaacattattgtaggttctcatgtgtggattgaagatccagtcgtg
gcttgggttgatggagaggtttttaagatcagaggtcatcaggtccatgtgcgcacaact
aatgggaaaatggtcgtagcaaatctcttgaaggtattccctaaagatatagaagctcca
cctggaggagtagatgacatgacaaaattatcatatttgcatgaacctggggttttgcaa
aacctagccacacgatatgagcttaatgaaatctatacatacactggtaatatcctgatt
gcagtgaacccattccaaagactaccacatctatatgacacccatatgatggaacaatac
aaaggagcaacattcagggagctgagcccccatgcttttgcagttgctgatgttgcttac
agggcaatgattaatgaaggaaaaaataactccatcttggtcagtggtgaaagtggtgct
ggcaaaactgaaacaacaaagttgcttatgagatatctggcatatttaggtggacgatca
gggattgaaggacggaccgtcgaacaacaagttttggagtcaaatccagttctcgaggct
tttgggaatgcaaaaactgttcggaacaacaactctagtcgctttggtaagtttgttgag
attcaatttgacaaaaatcggagaatatctggtgctgctattagaacctacttgcttgaa
agatctcgtgtttgccaaattaatgatcctgagagaaactaccactgcttttacctacta
tgtgctgctcctcatgaggatatcaaaaagtataaactgggaagtccaaactcatttcac
tatctaaatcagtccaaatgcattaaattggacggtgttgatgatgctgaagaatatatt
gcaattagaagagctatgggtatagttggaataagtgagcaagaacaggaggctatcttc
agggttgttgctgctatacttcatcttggtaatgtcaattttgcaaagggacaagatata
gattcatctgttatcaaggatgagaagtcaagattccatctgaacatgacagctcaactc
ctgatgtgtgatgcccagggtttagaaaatgctttgatcgaacgtgtcatggtgacacct
gaagaaattattaccagaactcttgttcctgcttctgcaattgttagcagagatgggctt
gcaaaaaccatttattcccgtttatttgattggttggtagaaaaaatcaatgtatcaatt
ggacaggatccagattcaaaacatttgattgggatacttgatatttatggttttgagagt
ttcaaatgtaatagttttgaacagttctgcatcaattttgcaaatgaaaagctgcaacaa
catttcaatcagcatgttttcaagatggagcaagaggagtatgccatggaggaaattgac
tggagctacattgaatttgttgataaccaagatgttcttgacttaattgagaagaaacct
ggtggtatcatcgcccttcttgatgaagcttgcatgtttcccaagtctacacatgagacg
tttgctcagaaattgtatcatacatttaaaagcaaccagagatttgccaaaccaaagctt
tctcgtacagattttacaatctgccattatgcaggcgaggtaacatatcaagctaatcat
ttcttagacaaaaacaaagattatgtggtatcggaacatcaggatttgctcaatgcttct
tcatgtccctttgtgtcggggttattccctccacttcctgaagattcatcgaggtcatcc
aagttctcttctatgggatcacagtttaaattacaacttcaagctttgatggaaactttg
agctctatgcaaccacattatattaggtgtgtgaagccaaataatgttctcaaacctgct
atatttgagaacttcaatgtcatccagcaattgcgatgtggaggagtttttgaagcaatc
aatataagttgtgctggttatcctactcgaagaacattttatgaatttctccaccgattt
gcccttcttgcaccagaatttatggaagaaaattatgatgacaagattgtctgtcaaaag
attttggacaaaatgagattgaaaagttaccaactaggcaagagtaaagtgtttttgaga
gccggccagatggctgaactggatgctcgaagagcagaggtattaggaagagcagccaga
accatacagaggcaaatccggacatatattgctcgcaaagaatttcttttgctacgggaa
gcatctattcaattccaaactttctgtagagggtggttggcttgtaagttgtttgtgcaa
atgaggcatgaagcagcagcactcaagattcagaaaaattaccattgctatattgcgagg
aaatcatatttagcacttgaaatgtcagcaattgtgttgcaaacaggcttaagggcaatg
tttgctcacaatgtatttagattcaaaaaacaaactaaagcagcaatctgcatccagtgt
cgttggcatagccatagagattattcatattataagagattgcagaaggcaacacttacc
tttcaatgttcatggaggcaaaagcttgctagaagagagctcagaaaactaagaatggct
gcaagggaaacaggagctctaaaagaggcaaaagataagcttgctaagcgggttgaggaa
ttaacttggcgtttacagttggagaaacgactaagaactgatctggaggagtcaaaagca
catgaagtgcataaatttcagactatgttatctgagatgcaactacaagttgaagagacc
aagtcaatgcttatcagggagcatgttgccgcacgaaaagctctagaagaagcacctcct
gttattaaggagaccactatcctggttcaagacatggaaaaaatcaattcattaacagct
caagttgaacagttgaaggctctattgcaaacgcagaagctggaaagtgatacagccaag
aaagcttacagtgaggcacaagaacgaaatgatgaactcattaagaaagttgaaaatgct
gaaagacaggttcataagtttcaagataccattcggaggcttggagaggaagtgtcaaat
ctggcatcagagaatcaagtgcttcgccagcaagcactttccatttcaccaactagcaga
gtgttaactgtgcatccaaaagcaacaatcttccctagaacgccggagaataataatgtt
ctatctggagaaacaaaaccttcattggattggagtccttcattaccaaatccaaagaat
cttgaaattgatgaaaaaccacaaaagtcactgaatgagaagcagcaggaaagtcagaac
ttgcttcttaagtgcatctctgaagagctaggattctgtaagggtagacctgttgctgct
tgccttatatataaatgcctcctccaatggagatcttttgaagttgaaaggactagtatt
tttgaccaaataatccaagcaataggttcaaaacttgaggataacactaatgtattatcc
tattggttgtccaatacatctacactattgctgcttcttcaacgcacactgaaagcaagt
agcttgggaagttttactccacagaggcggagaacatcagcttctgtgtttggaaggatg
cctcaaggaattcgagcatcacctcggagtgctggaactccttttctgaatggtcgcatg
gttggtggatcaaatgacttgcaccaagttgaagctaaatatccagctttgctttttaag
caacaacttactgcatttgttgagaaaatttatggaatgataagggacaacttaaagaaa
gagatatctcctgttcttagcttgtgtatacaggctccaaggacatcccgtgcaagaata
gtcaaaggaactcgttcaccagcaaatgctgtggcccaacaagctcttatggaacactgg
cacagtattgtgaaaagcttagcaagctacatgaaaccactgaaagctaattatgcccct
ccattcctagttcaaaagttgttcactcaaatattttcttccatcaatgttcaactattc
aacagccttcttctgagacgtgagtgctgttcgtttagcaatggggaatatgttaaagca
ggacttgctgaattagaacattggtgcaatgaagcaactgaagagtatgctggttcttca
tgggatgaattgaagcatattaggcaggctgttggattcctggttttacatcagaaacca
aagaagacactgaaggagataaccaaagatttatgtccagttcttagcatacaacagtta
tacaggatcagtactatgtactgggatgacaagtatggcacacagagtgttacatcagag
atcatttcaagtatgagacttgtgatgaccgagggctcaaataattcttccaataattct
ttcttgttagatgatgattccagcattccatttttggtcgatgatatctcaaagtcaatg
acagaaatagatatagcagatatcgatccaccgcctttcctttgtcagagttcgggcttt
gcatttttggcacaatga
DBGET
integrated database retrieval system
