Zingiber officinale (ginger): 121970801
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Entry
121970801 CDS
T08725
Name
(RefSeq) peroxisome biogenesis protein 1-like isoform X1
KO
K13338
peroxin-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121970801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121970801
Membrane trafficking [BR:
zof04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
121970801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
AAA_22
NPHP3_N
AAA_5
RuvB_N
NACHT
AAA_14
nSTAND3
AAA_18
RNA_helicase
ATPase_2
AAA_25
AAA_28
NB-ARC
IstB_IS21
AAA_19
AAA_17
Mg_chelatase
AAA_11
AAA_24
AAA_33
Bac_DnaA
AAA_7
AAA_2
AAA_29
ORC-CDC6-like
ABC_tran
NTPase_1
DUF815
AAA_30
TsaE
KTI12
AAA_lid_PRS2_C
Zeta_toxin
AAA_23
Viral_helicase1
TIP49
PhoH
Sigma54_activat
FtsK_SpoIIIE
ATP_bind_1
KAP_NTPase
UvrD-helicase
cobW
Motif
Other DBs
NCBI-GeneID:
121970801
NCBI-ProteinID:
XP_042377696
LinkDB
All DBs
Position
4A:120294980..120310794
Genome browser
AA seq
1133 aa
AA seq
DB search
MEFEVRAVGGIESCFVSLPLSLIQTLENTRGGFLPPVLALQLRACSGGGCWNVGWSGSAS
KTAAIEVDQLLAECISLPDHTRVQIKAIANLPKADFVNIEPSSEDDWEILELNSELAEEA
ILKQVGVVHEGMKFPLWLHGHVMVELVVVSTSPRESVVQLVPGTEVVVEPKRRKNEVLTH
QSVQKQNSRKELRMKALLRVQAEKRKYVHKIEFKDIDVLVFLSYIAFIHPETAKKFSLEN
LQLATVIPKLWLKEISQNSNAISERRGDNHFNMQENSGLPTTSKVKPRHAVVHIIYSDAV
AKGHVMLPQSLRHFIGSGLHSWVFIKKHFRSPKKDIFSMTVSPLRFNLVGNGKVNDDKRN
TIESHTILKQEGMATDGDTSTGGILDLSLQESSFSPLTYETLLNEDSSNVGIGIKLENKL
LVKLWMIGQIGAIASQNSQMKVNSVVLTNETLLHIEIIDHKFGKKKEELSMQGTNERENV
GNRKIEIFYLLRINYIDSSKCDVDASFEFDITAGSKNSDNLHDLELALGILEVGEPLSFD
SISESVFKRNFHLTASSLSWLKASISDVTDRLLILLSPESMNLISAYDIPSPGHILIYGP
PGSGKTTLARAVARHFEEHEEILAHIIFISCSKLALEKSLTVRQAISEYISEALSCSPSI
VIFDDLDNIISFSSGEGSQPSSSATALVNYVIDIVDEYGNRSRSSCGYGPVAFVASVQSL
QNIPPSLSSSGRFDFHVQLVSPAVSERGQILKHEIEKRALLCPDDIVSEIASKCDGYDAY
DLEILVDRAVHAAVGRFLPSRVDKDTELVLQKEDFSQAMHEFVPIAMRGLTKAASEGGHS
GWDDVGGLADIRNAIQEMIELPSKFPGIFSQSPLRLRSNVLLYGPPGCGKTHIVGAAAAA
CSLRFISVKGPELLNKYIGASEQAVRDLFSKAAAASPCLLFFDEFDSIAPKRGHDNTGVT
DRVVNQLLTELDGVEALTGVFVFAATSRPDLLDAALLRPGRLDRLLYCDFPSWHERLDIL
KVLSKKLPLAKNIDLETVASMTEGFSGADLQALLSDAQLASVHELLDSENSDKPGKTPVI
SNQLLMSVASKARPSVSEDEKCRLSRIYNRFLELKKSVSAQTRDAKGKKATLA
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgaggtgcgggcggttggcgggattgagagctgcttcgtctcgctccctctt
tctcttatccaaactctcgagaatacgagaggcgggttccttccaccggtgctcgctctc
caactccgagcctgctctggaggaggttgttggaacgtcggatggtccggctccgcctcc
aagaccgctgcaatcgaggtcgatcaactattggctgaatgcatttctttaccggatcat
actagagtgcagatcaaagccattgctaacctaccaaaagctgacttcgtcaatatagag
ccaagcagtgaggatgactgggagattttggagctaaactcagaacttgctgaagaagct
attttgaaacaagttggcgttgtccatgaagggatgaaatttcctttatggttacatggc
catgttatggtggaattagttgtggtctctacttctcctagggaatcggtagttcaactt
gtgcctggtacagaagttgttgttgaaccaaagagacggaaaaatgaagtgcttacacac
cagagtgttcaaaagcaaaattcaagaaaagaactaaggatgaaggcactcttacgtgtg
caggctgaaaaaaggaaatatgtgcataaaattgagttcaaagatattgatgttttggtg
tttctaagttatattgcatttatacatccagaaacggctaagaagttttcattagaaaat
ttacaattagcaacagttatacccaaattatggcttaaggagatttcacagaatagtaat
gctatttctgagagaagaggagataatcatttcaacatgcaagaaaatagtgggcttcct
acgactagtaaagtgaagccaagacatgctgtggtccatatcatatattctgatgcagta
gcaaaaggccatgtaatgcttcctcaatctcttcgtcatttcataggatctggtttgcat
tcatgggttttcattaaaaagcacttccgaagtccaaagaaagacattttttcaatgaca
gtttctcctcttcgatttaatttggttggaaatggtaaggttaatgatgataaaagaaat
actattgagagccacacaattctcaagcaggaggggatggcaactgatggagatacttcc
actggaggtatcttagacttgtcacttcaagaatcctcattctctcctttgacctatgaa
actcttctaaatgaggattctagcaatgttggtattggtataaaattggagaataagtta
cttgtaaagttatggatgattggacaaattggggccattgcatctcaaaatagtcagatg
aaagttaactctgttgttttaacaaatgaaacattgcttcacattgaaataatagatcat
aaatttggtaaaaagaaagaggagctatctatgcagggtactaatgagagggaaaatgtt
gggaaccgcaagattgagattttttatctactcagaatcaattatattgactcatcaaaa
tgtgatgtagatgctagctttgagtttgacatcactgctggcagcaaaaacagcgacaat
ttgcatgatttggaattggcgcttggaatattggaagttggggaacctctatcctttgat
tctatttcagagagtgttttcaaaagaaacttccatctaactgcatcttccttaagttgg
ttgaaggcatccatttctgatgtcactgatagattgctcatccttctatctccagagtct
atgaatttgatttctgcttatgatattccatctcctgggcacatacttatttatggacct
cctgggtctgggaaaactacattagccagggctgttgctaggcattttgaagagcacgaa
gaaatcttagctcacataattttcataagctgttcaaaacttgctcttgaaaagagtctg
actgtgcgacaagcaatttctgaatatatatctgaagctctatcctgttcaccatctatt
gtcatttttgacgatctagacaatatcatttcattttcttcgggcgagggatctcaacca
tccagttcagctactgctttggttaactatgttattgatattgtagatgaatatgggaat
aggagccgaagttcttgtggatacggtcctgttgcttttgttgcttctgtgcagtctctc
cagaatattcccccatctttgagttcttcagggaggtttgacttccatgttcaactagtt
tctcctgctgtctctgaacgtgggcaaatattaaagcatgaaattgaaaaacgtgcttta
ctgtgtcctgatgatatagtctctgaaattgcttcaaaatgtgatggatatgatgcctat
gacttggaaattttggttgatagggctgtacatgctgctgtcggtcgttttttgccttct
agggttgataaagatacagaacttgttctgcagaaagaagacttctcgcaggcaatgcat
gagtttgttccaattgcaatgcgtggtctaacaaaagctgcttctgaaggcggacacagt
ggttgggatgatgttggtggacttgcagatatccgaaatgctattcaggagatgattgaa
ttaccttcaaagtttcctgggatattttctcaatcaccattaagattgagatcaaatgtc
ctcttgtatgggcctcctggttgtggaaaaactcacattgtcggtgctgcagcagcagct
tgctccttgaggttcatatctgtcaagggacctgagttgctgaataagtacattggtgct
tctgagcaagctgtccgcgatctgttctccaaggcagctgctgcttctccttgtcttcta
ttttttgatgaatttgactctattgcaccaaagagggggcatgataatactggagtgaca
gatcgtgttgttaatcagttgctaactgaattggatggcgtggaagcattgacaggggtg
tttgtgtttgctgctactagtcggccagatctacttgatgctgcacttttgcgacctgga
aggcttgatcgacttctttactgtgattttccatcctggcatgagcgattggatattctt
aaggttctgtctaagaagcttcctttggcaaagaatattgatctggaaacggtagcatca
atgaccgaaggctttagtggtgcagatcttcaagcactcctgtcagatgctcagcttgca
tcagttcatgagcttctggatagtgaaaacagtgacaagcctgggaaaacacctgttatc
agtaatcagcttctgatgtctgttgcttcaaaggctcgaccttccgtatcagaagacgag
aaatgcaggctatccaggatttataatcggttcctggagttgaagaaatctgtttctgca
cagacgagggatgcaaagggcaaaaaggcaaccctagcttga
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