Zingiber officinale (ginger): 121970805
Help
Entry
121970805 CDS
T08725
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic-like
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00500
Starch and sucrose metabolism
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
121970805
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
121970805
Enzymes [BR:
zof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
121970805
Glycosyltransferases [BR:
zof01003
]
Polysaccharide
Storage polysaccharide
121970805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_4_4
Glyco_trans_1_4
Motif
Other DBs
NCBI-GeneID:
121970805
NCBI-ProteinID:
XP_042377705
LinkDB
All DBs
Position
4A:complement(120366808..120379909)
Genome browser
AA seq
1146 aa
AA seq
DB search
MAMSLQPQWALSCRRTTSANTRVRVMPVLGLFSRSSLRYQEVRIKFIPCALASSDYSKRH
PKRILIPKTKASSTPRGFAPIARPLVGTSTQKRDQNDTEDKEPSHTPSSTLTDKIFTRDS
QVADKNFSGIPFTATIDTECDVPTVLSGNEEHGQGLGTLYVKVDHSDKIIENGEKNGQFN
EVERHVALGNDQIGGISISEKTSIADQQEEKPSNRENNFDKDDTDFGDSLLKHREEFDAL
KQRKQLEDLANENFSRGNKIFVTPEVVTPDQVIKIFLNQNLSVLATETEILIKGAYNGWK
WKFFTEKLQKTNLIGDWWACELYVPKEAYRVDFVFFNGADVYENNDYKDFSISVEGDMDE
TKFEEFLLEEKKKELERLAAEENEKKRLAEEQRQREAEKAAIESDRLQAKTQVEKRRQGL
HHVMKLASQSAHHVWQMEPSLFEGGDRIKLYYNRSSHPLAHASEIWVHGGHNNWSEGLSI
VRELSRSEKVDGDWWCVDVVVPDQAVVLDWVFANGPPGKAVCYDNNNLNDFHATVPKGMP
DELFWVEEEQRIFRKLQEDRRKKAEKIERVKAETKERTMKMFLLSQKHIVYTEPVDVQAG
KMVSIFYNPSNTVLNGKPEVWFRCSFNRWSHPKGPLPPQKMVLAENGSHHKITVKVPIDA
YMMDFVFSEKEDGGLYDNRNKMDYHIPVTGSIAKEPPMHIVHISVEMAPIAKVGGLGDVV
TSLSRAVQDLGHKVDVILPNYNCMNLNNVKDFHYHSTFSWGGTEIKVMFGKVEGLSVYFL
EPQNGMFSVGCIYGRNDDGNRFGFFCHAALEFLLQSGFQPDILHCHDWSSAPVAWLFKEH
YIHNGLSNSRVVFTIHNLEFGIQNIARAMMFADKATTVSQTYSREISGNSAISPHLGKFH
GIVNGIDPDIWDPCNDQFIPVSYTSENVMEGKRAAKDALQQRLGLKRSDLPLVGIITRLT
VQKGIHLIKHAVWRTLEQNGQVVLLGSAPDPRIQNDFVNLGNQLHNSHADRARFCLTYDE
PLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGSVPIVRKTGGLYDTVFDVDNDKERAQA
QGLEPNGFSFEGTDAGGMDSALNRAFPAWSNAREWFYSLCKRVMEQDWSWNRPALDYMEL
YHSTRN
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtctctacagccgcagtgggcgctatcttgccggagaacgacctcggcgaac
acccgggtcagggtgatgccggttctcgggcttttctcccgctcatcactaaggtatcaa
gaagttagaatcaaatttataccttgtgcgctggcaagttcagactattctaaaaggcac
cccaaaaggatcttgatcccaaagacaaaggcttcttctactccaagaggatttgctcct
atagctagaccattggtaggaacgagcactcaaaaaagagatcaaaatgacaccgaagac
aaagaaccatcgcatactcctagcagtaccctaaccgataaaatatttactagggattca
caagtggctgataaaaatttctcaggcatcccttttactgctacaattgatactgaatgt
gatgtacctacagtgctgtctggcaatgaagaacatggacaaggtctgggaactctgtat
gtcaaagttgatcatagtgacaaaataatagaaaatggggaaaagaatggccagttcaat
gaagtggaaaggcatgtggcccttggtaatgatcagataggcggaatatcgatatcagaa
aagacatcaatagctgatcaacaggaggaaaaacccagtaaccgtgaaaataattttgat
aaagatgacactgattttggggactcattactcaaacatagagaagaatttgatgcactc
aaacaaagaaaacaattggaggatcttgctaatgaaaacttctcaagaggtaataaaata
tttgtgactccagaagtggtgactccagaccaagttatcaaaattttcttgaaccaaaat
ttatctgtattggcaactgaaactgaaattttaatcaagggtgcttacaatggttggaaa
tggaaattttttacagagaaattgcagaaaaccaatcttataggagattggtgggcttgt
gaactctatgtgcctaaggaggcatatagagtggattttgtatttttcaatggtgccgat
gtatatgagaataatgattataaagatttctctatatctgtagaaggtgatatggatgaa
actaaatttgaagaattcttgcttgaagaaaagaagaaggagcttgaaagacttgctgcc
gaggaaaatgaaaagaaaaggctggcagaagagcagcgccagagggaagcagaaaaagct
gcaattgagtctgacagattacaagcaaagacacaagtagagaaaagaaggcagggattg
catcatgtaatgaaattggcttcacaatcagctcaccatgtatggcaaatggagcctagt
ttatttgaaggtggtgacaggattaaactgtattataacagaagttcacacccacttgcc
catgcttcagagatttgggttcatggaggtcacaacaactggagtgaaggactgtctatt
gtcagggaactttcccgttctgagaaagttgatggtgattggtggtgtgttgatgttgtt
gtgcctgatcaagcagtggttctggattgggtttttgccaatggaccaccaggaaaggca
gtttgttatgacaacaacaaccttaatgactttcatgctactgtaccaaagggcatgcct
gatgaacttttctgggttgaagaagagcaacgaatcttcagaaagcttcaagaagacaga
agaaaaaaggctgaaaaaattgagcgcgtgaaagctgaaacaaaggaaaggacaatgaaa
atgtttttgttgtctcaaaagcatatagtgtatactgaaccagttgatgtgcaagctgga
aaaatggtctccattttttataatccatctaatactgtcctaaatggaaagcctgaagtt
tggtttaggtgttcattcaaccgttggagtcaccctaaaggacctctaccacctcaaaaa
atggttctggcagagaatggttcacaccataaaataactgttaaggtccctattgatgcc
tatatgatggattttgttttctcggagaaggaagatggcggactctatgataacagaaat
aagatggattatcatatacctgtcacgggaagcattgcaaaggaaccacctatgcacatt
gtccatatttctgttgagatggcacctattgcgaaggttggtggtcttggggatgttgtt
actagtctttctcgggcagttcaagatttgggccataaagttgatgttattcttccaaat
tataattgtatgaatcttaacaatgtgaaagacttccattaccacagcaccttttcttgg
ggtgggacagaaataaaagttatgttcggcaaggttgagggcctttctgtatatttttta
gagccacaaaatgggatgttctcggtggggtgcatatatggtagaaatgatgatgggaac
agattcggtttcttttgtcatgctgccctggagtttctccttcaaagtggatttcaacct
gatattttgcattgccatgattggtccagtgctcctgtagcatggttatttaaagaacac
tacattcacaacggactgagtaattctcgagtagtttttacaattcataatcttgagttt
gggatacagaacattgccagagcaatgatgtttgctgataaggctaccactgtatcccaa
acatattctagagagatttctggaaattctgcaatatctcctcatctcggcaagttccat
ggtattgtaaatggaattgatccagatatctgggacccatgcaatgatcagttcatcccg
gtgtcgtacacatcagaaaatgtgatggaaggtaagagggctgctaaagatgcattgcaa
caaagactaggattgaagagatcagaccttcctttagtaggtattattacccgcttaaca
gttcagaagggaattcacctgatcaaacatgctgtttggcgtacacttgaacaaaatgga
caggttgttcttcttggttcagctccagatcctcgtattcagaatgattttgttaacttg
ggaaatcaattgcacaattcacatgctgatcgtgcacgcttttgcttgacgtatgatgaa
cctctttcacatctgatttatgctggtgcagactttattcttgttccatctatttttgaa
ccctgtggattgacccaacttattgctatgagatatggctctgttcctatagttcgtaaa
acaggaggactttatgatactgtattcgacgttgacaatgataaagaaagagctcaagca
caaggccttgaaccaaatggattcagctttgaaggaactgatgccggtggcatggactct
gccctcaacagagccttccctgcttggtccaatgctcgggagtggttctactcgttatgc
aagcgtgtgatggagcaagactggtcctggaatcggcctgcactggactacatggagctc
taccattccaccaggaactaa
DBGET
integrated database retrieval system
