Zingiber officinale (ginger): 121970807
Help
Entry
121970807 CDS
T08725
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121970807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121970807
Membrane trafficking [BR:
zof04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
121970807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
121970807
NCBI-ProteinID:
XP_042377708
LinkDB
All DBs
Position
4A:complement(120418060..120421306)
Genome browser
AA seq
205 aa
AA seq
DB search
MRVTALVILNSAASSSSSPEAADPVVLANATDVSRFGYFQRFAAREFILFVARTVANRTP
AGQRQSVQHEEYKVHSYNRHDLCALAFMDDHYPVRSAFALLNQILDEYQKAFGESWRGVK
VDATQPWPYLTEALTKFQDPAEVDKLFKIQRDLDETKIILHKTIENLLDRGVKLDDLVEK
SSDLSAASQMFYKQAKKTNQCCTML
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgagggttacggcgttggtgatcctcaattccgccgcctcgtcgtcatcttcgcctgag
gcggcggacccggtggtgctggctaacgccaccgacgtcagccgcttcggttacttccag
agattcgctgcccgtgagttcatcctcttcgtcgcgcgtaccgtcgccaaccggacgccg
gccggccaacgccagtcggtgcagcatgaagaatacaaggtgcattcttacaacagacat
gatctttgcgctttggctttcatggatgatcattaccctgtgcgaagcgcctttgccctc
ctaaaccagatactggatgaatatcaaaaggcttttggtgaatcttggagaggtgtaaag
gttgatgctactcaaccttggccatatctgactgaagcattgacaaaatttcaggatcca
gcagaggttgacaaattgtttaaaattcaaagggacttggatgaaactaaaattatcctg
cataaaactattgagaatttattagacagaggagtgaaattggatgatttggttgagaag
agctcagatcttagtgctgcatcacagatgttctacaagcaggccaagaaaacaaaccaa
tgttgtacgatgctatga
DBGET
integrated database retrieval system
