Zingiber officinale (ginger): 121970833
Help
Entry
121970833 CDS
T08725
Name
(RefSeq) ATPase family AAA domain-containing protein At1g05910-like
KO
K22531
ATPase family AAA domain-containing protein 2 [EC:3.6.1.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121970833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Bromodomain
AAA_lid_3
IstB_IS21
AAA_2
AAA_5
nSTAND3
AAA_16
AAA_18
AAA_22
AAA_30
TIP49
RNA_helicase
NPHP3_N
ABC_tran
KTI12
AAA_7
AAA_14
Sigma54_activ_2
SLFN-g3_helicase
AAA_33
Mg_chelatase
Sigma54_activat
Parvo_NS1
AAA_19
AAA_3
Motif
Other DBs
NCBI-GeneID:
121970833
NCBI-ProteinID:
XP_042377745
LinkDB
All DBs
Position
4A:121710119..121721878
Genome browser
AA seq
1174 aa
AA seq
DB search
MDSKRDGASIAPLRTSDRLRRRPKYFGRPYLYYKPMIRKRIKSKRRDAASQIVKRLLRPR
NHTIKVPSPNSMVTNLRRSTRKRKMSINLEDYDTDTSGSEDDDLLASKYQPSQQRKRITR
TNSLPRREGLRPRRSLNDRRAYQETEEGQESSEEQESEDETENDGDEDEDAGNEEDGDLG
DEVAEDEEVGDEVAEDEEMGDEVAEDGDDEEGEEEQEGRKRYDLRNRAEVRRLDSEKEGK
QRIVSPRKILHRGMNSKNKRYLSKDGSRVHRRRGMSLPDDSDDSLLVDEFNEGPSTPWMR
NRSGMPWLLGGLDIHGSTAWGLNVAASGWSYQGEAISSLSTGIQTAGPSSKGGADIQPLQ
VDENVSFEDIGGLSEYINALKEMVFFPLLYPDFFAKYHITPPRGVLLCGHPGTGKTLIAR
ALASAASKAGQKVSFYMRKGADVLSKWVGEAERQLKMLFEEAQRNQPSIIFFDEIDGLAP
VRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFIFPL
PGYEARAEILSIHTRKWKEPVSKELKMELAASCVGYCGADLKSLCTEAAIRAFREKYPQV
YTSDEKFVIDVDSVRIERHHFLEAMSTITPSSHRGSIVHSRPLSSTVAPCLQRHLHRIME
QLSDIFSFLSNSDVSRLSAFSCGSGIPLVYRPRLLIYGDESAGLDHVGAAILHQLEKFPI
HSIGLPSLLSDPSAKTPEEALVHIFSEARRTTPSILYLPQFHIWWETADQLLKAVLKTLL
YELPSNLPVLVIGTSLVSLEQMDVDATSIFALSNIYQLDKPTANDRLNFWEKMVGALLSI
QLEQSTDKELTNLPELPKAPKEISHAKLSELKAKSEAEQHALRRLRMCLRDVCNRILYDK
RFSAFHYPVSDEDAPGYHSIIHNPMDMATILQRVDCGQYRTRSEFSQDIDLIVSNAKAYN
KDDYTGARIVSRACELRDVVEGMLTQMDPTLISFCDKIAAQGPCLQLADDADGSNVSAVP
VAQLASVTRASARLRNVQPEVNPTQSYEALKRQKNHTGIDEGSIAEPVQQESQELGASAP
VDNSNKEQLEASEVAPVPENDHDVDMADAEFSERLEAVKQRFIERTEGHGIPELELLYIR
AMKDVTVVGSKHTEDAKLLVLRHLSKFVEDDANI
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaaaagagatggggcatcaatcgcgcctctgcggacaagtgatcgactccgc
cgacggcctaaatactttggccggccttacttatactacaagcccatgataaggaagagg
atcaagtctaagcggagggatgctgcttctcagatagtgaagaggctgttgaggccgagg
aatcacactattaaggttccatctccaaattctatggtaacaaacttgcgccgctcaaca
agaaaacggaaaatgtctataaatttagaagattatgacacagatacttctggatcagaa
gatgatgatttactggcttccaaataccagccttctcagcagagaaaacgaattacaaga
actaattctcttcctcgtcgagaaggattgcggcctagaaggtctttgaatgatagaaga
gcataccaagaaacagaggaaggacaagagagttctgaagaacaagaatctgaagatgaa
acagaaaatgatggcgatgaggatgaggatgctggaaatgaagaggatggtgatttgggt
gatgaagtagcagaagatgaggaagtgggggatgaagttgcagaagacgaggaaatggga
gatgaagtagcagaagatggtgatgatgaagagggtgaagaagaacaggaaggaaggaaa
cgatatgacttgaggaaccgtgctgaggttcgtaggcttgattctgaaaaggagggcaaa
caaagaattgtgtcccctcgaaaaatacttcatcggggtatgaattccaaaaacaaaaga
tatctgagcaaagatggatctcgagttcataggcgtcgaggtatgtcattacctgatgat
tcagatgattctcttcttgtggacgaattcaatgaaggcccatctaccccttggatgcga
aacagaagtgggatgccatggctcttgggtggcctggatatacatggttcaacagcatgg
ggattaaatgttgctgcatctggatggagttatcagggcgaagctattagttcattatct
acggggattcaaactgccggaccaagttcaaagggaggggcagacattcaaccattacaa
gtggatgaaaatgtgagtttcgaagacataggaggtctttcagagtacattaatgcactt
aaggaaatggtattctttcccttactatatcctgatttctttgccaaatatcacataact
cctccaaggggagttctgctttgtggtcacccaggcactgggaaaacattgattgctaga
gcattagcgtctgctgcatctaaagctggtcagaaagtcagcttttatatgcgcaaggga
gctgatgttctcagcaaatgggttggtgaggcagagagacagctgaaaatgctttttgaa
gaagctcaaaggaatcaaccttcaattatcttctttgatgagatagatggccttgctcca
gttagatccagcaagcaggagcaaattcataattctattgtttcaacattgctagctctt
atggatgggttggattctcgtggacaagttgttctgataggtgctaccaatagaattgat
gccattgatggagctttgcgccgcccagggcgttttgatcgagaatttatttttccttta
cccggttatgaggcacgtgctgaaattttgtctattcatacacgtaaatggaaggaacct
gtatcaaaggagttaaagatggaacttgcagctagttgtgtgggctactgtggagcagat
ttaaaatctctttgcacagaagctgctatccgtgcttttcgtgagaaatatcctcaagtc
tataccagtgatgagaagtttgtcattgatgttgatagtgttaggattgaaagacatcac
tttttagaagccatgtctacaatcactccctcatctcacaggggatccattgtgcactct
aggccattgtcttcaactgttgctccctgcttgcaaaggcatcttcacagaataatggaa
caactgtctgatatattttctttcctttcaaattcagatgtcagcagactctctgctttt
tcctgtggctctggaattcctcttgtttataggccccgtcttctaatatatggggatgaa
agtgctggattggaccatgttggagcagctattctacatcagttggagaagttccctatt
cattctattgggcttccatctcttctatctgatccgagtgctaaaacaccagaagaggct
ttggtgcatatattcagtgaagcaagaagaactactccctctatactttacttaccacag
ttccatatttggtgggaaacagctgatcaactacttaaagctgttttgaagactcttttg
tatgaattgccttcaaatcttccagttctagttataggaacatctttagtatccctggaa
caaatggacgtagatgctacttccatctttgctctctctaacatatatcaattggataaa
ccaaccgcaaatgacaggctaaatttttgggagaaaatggttggagctctgttgtctatc
caacttgagcagtcaacagacaaagaactgacaaatcttcctgaacttcccaaggcccca
aaggaaataagtcatgcaaaactctcagagctcaaagcaaaatcagaggctgagcagcat
gctcttcgccggctccggatgtgcctccgagatgtttgtaacaggattttgtatgacaag
cgatttagtgcatttcactatcctgtgtctgatgaggacgcacctggttatcattctatt
attcataatcctatggatatggcaactatcttgcagcgagtagattgtggacaataccgc
acccgttcagaattttcacaagatattgacctgattgtgtctaatgctaaggcttacaat
aaagatgattatacgggtgctaggatcgtaagcagagcttgtgaactccgtgatgtggtg
gaaggtatgttgacacagatggatccaacactaatttcattctgtgacaaaattgctgca
caaggcccatgcctgcaattggcagatgacgccgatggatcaaatgtttctgcagtacct
gttgctcaactagcttctgttactagagcaagtgcccgactccgtaatgtccaaccagaa
gtaaacccgacacaaagttatgaagcattgaagcggcaaaagaaccatacaggtattgat
gaaggatctatagctgaaccagtccagcaagaatctcaagaactaggtgcaagtgctcca
gtagacaattcaaataaggaacagttagaagcatcagaagtagcgcctgttcctgaaaac
gatcatgatgttgatatggctgatgcagagttctccgagcggttagaagctgtgaagcag
cggtttattgagcgaacagaaggccatggcattcctgagcttgagctgctctacatcaga
gcaatgaaagatgtgacagtggtaggaagtaaacatacagaagatgctaagcttctggtt
ttgaggcatctttcgaaatttgttgaggatgatgcaaatatttaa
DBGET
integrated database retrieval system
