Zingiber officinale (ginger): 121970897
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Entry
121970897 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC121970897 isoform X1
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121970897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
121970897
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
121970897
DNA repair and recombination proteins [BR:
zof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121970897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
121970897
NCBI-ProteinID:
XP_042377830
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All DBs
Position
4A:123183903..123188036
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AA seq
394 aa
AA seq
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MPPGAPKVRSINVADSEARPVLVPGGNQARSVAAAQKPASKPLNKTENPEAAAAENKKKK
KDTSPTANLPPVRSSLSAPSALRRHDWLLQSSLSMNASCSSDASTDSFCSRASTGRIGRT
NLMSKRRQSIPTVSKIVAKAEKNVPDDAAMSIPELVHGKRKCAWVTTNTESCYAQFHDEE
WGIPVHDDKKLFELLVLSGALAEFTWPAILTKRQIFRDVFLEFDPVAVSKLNEKKIVAPG
STGSSLLSEPKLRAIIENARQILKIIDEFGSFDKYCWSFVNYKPIISRFRYPRQVPAKTP
KADVISKDMVRRGLRSVGPTVVYSFMQAAGLTNDHLIRCFRFEECITAASPSPNEVHEAT
VPVNLKAKENLLDQGLMEQIDSELSRAVEEMNIS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctggagctccaaaggtccgttccatcaatgtggctgattctgaggcgagacct
gtcctagtgcctggcggaaaccaggcaaggtctgtggcagctgctcaaaagccagcttcg
aagcctttgaataaaactgagaacccagaggctgctgctgctgagaataagaagaagaag
aaggatacaagtccaactgctaatctgccacctgttcgttctagtctaagcgctccctca
gctcttaggaggcacgattggcttttacaatcaagtttatcgatgaatgcttcttgctcc
tcagatgcgtcgacagattcattctgcagccgagcctccacaggaaggattggtaggaca
aacttgatgagcaagcggagacagagcattcctactgtaagtaagattgtggctaaagcc
gagaagaatgttccagatgatgcagccatgtctataccggaacttgtgcacggaaagaga
aagtgtgcttgggtgacaaccaatacagaatcatgttatgctcaattccatgatgaagaa
tggggaattccggttcatgatgacaagaaattatttgagcttcttgtactctctggtgct
ctagctgagtttacatggccggctatcctcaccaaaaggcagatatttagggatgttttc
ttggaattcgatcctgttgcagtttccaagttgaatgagaagaagattgttgcacctgga
agcactggtagctcccttttgtcggagccaaagttgcgagctatcattgagaatgcacgc
caaatactcaagataatcgatgagtttggatcatttgataaatactgctggagctttgtg
aactacaaacctatcatcagcagattccgctaccctcgtcaggtgcccgctaagactcca
aaagcagatgtcataagcaaagatatggttcggcgaggccttcgcagcgtgggcccaact
gtagtatactccttcatgcaggctgctggactgacaaatgatcacctcattcgctgcttc
cggtttgaggagtgcataacagctgcttcccctagtccaaacgaagtccatgaagctacg
gtaccggttaacctcaaagccaaagagaacttactagatcagggactgatggaacaaatt
gattcggaattgtcaagagccgtggaggagatgaatatttcgtag
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