Zingiber officinale (ginger): 121970912
Help
Entry
121970912 CDS
T08725
Name
(RefSeq) histidine--tRNA ligase, chloroplastic/mitochondrial-like
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121970912
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
121970912
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
121970912
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
121970912
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class II (A)
121970912
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121970912
Prokaryotic type
121970912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2d
DUF4473
Motif
Other DBs
NCBI-GeneID:
121970912
NCBI-ProteinID:
XP_042377844
LinkDB
All DBs
Position
4A:complement(123492548..123504948)
Genome browser
AA seq
487 aa
AA seq
DB search
MAAFPVLHYHRLLLRPGLRLSRTPFSPPLLRPFSFPVSARSSSSSSSSASTASREETEEI
AQQQQQQLIDVNPPRGTRDFPPEDMRLRNWIFQHFREVSRILSFEEVDFPVLESEALFIR
KAGEEITQQLYNFEDKGGRRVVLRPELTPSLARLVIKQGKSVSLPLKWFTIGQCWRYERM
TRGRRREHYQWNMDIFGVTRVRAEAELIHAIVLLFERLGITSSDVGIRISSRKVLQAVLQ
MYSIPENLFAEVCVIVDKLGKITKEEVEKELMLAGVTPEAVKGIVEVLSLKSLERLEEIL
GSDGEAVADLKKLFSLADHYGYSQWISFDASVVRGLAYYTGIVFEAFDREGKLRAICGGG
RYDRLLSTFGSEDIPACGFGFGDAVVVELLKEKGLLPDLARQVDDIVFPLDEELEDQASM
VASSLRRKGRSVDLVEDRRLKWVFKHAERINASRLFLVGNSEWQRGTVRVKVLSTREEYE
VKIDELG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttccctgtcctccactaccaccgccttctcctccgccccggcctccgcctc
tcccgcacacctttctcccctccactcctccggcctttctccttccccgtctccgcccgg
tcctcttcttcctcctcctcgtccgcctcaacggcctcccgagaggagaccgaggaaatc
gcgcagcagcagcagcagcagctcatcgatgtgaacccgccaagagggacgagggatttt
ccgccagaggacatgaggctgcgcaactggattttccagcactttagagaggtgtcccgg
attctatctttcgaagaggttgacttcccggtccttgagtctgaggcgcttttcatcagg
aaggctggggaagagataacccaacaactgtataattttgaggacaaaggaggccgccgt
gttgttttgaggcccgaactcaccccctcacttgcacggctagtaatcaagcaaggaaag
tctgtctctcttccattaaaatggtttacgatcgggcaatgttggagatatgaacgaatg
acaaggggaagacgtcgagagcattatcaatggaatatggatatctttggtgtaaccaga
gtgcgggcagaggctgaacttattcatgctattgttctgttatttgaacggcttggaata
acatcatcagatgtgggaatcagaatctctagccgaaaggtccttcaggcagtgctgcaa
atgtattctataccagaaaatttgtttgcagaagtttgtgtgattgtcgacaaattggga
aaaatcaccaaagaagaggttgagaaggaattgatgttggctggggtgacaccagaagct
gtcaaaggaatagttgaagtactctcccttaaatcattggagagacttgaagagattctg
ggatctgatggtgaagctgttgctgatttgaaaaaactgttttcacttgctgaccattat
ggctattctcagtggattagtttcgatgcatctgtagtccgtggacttgcctattacaca
ggaattgtcttcgaggcatttgaccgagaaggtaagctccgagcaatttgtggcggtgga
agatatgatcgattgctatccacattcggtagtgaagatattcctgcttgtggttttgga
tttggggatgctgttgtagttgaattactgaaggaaaaagggcttctacctgatctggca
cgccaagtagatgacatagtctttccgttggatgaggaactcgaagatcaggcctcaatg
gttgcctcctcccttcgaagaaaaggccgcagtgtcgatcttgtagaggatagacgcctc
aaatgggtttttaagcacgctgagcgaatcaatgcaagtaggcttttcttggtgggcaat
tccgagtggcaacgaggcacagtgcgggtaaaggttctatcgacaagagaagaatacgaa
gtcaaaattgacgagctgggttga
DBGET
integrated database retrieval system
