Zingiber officinale (ginger): 121970951
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Entry
121970951 CDS
T08725
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A-like
KO
K14026
SEL1 protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121970951
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Gene cluster
GFIT
Motif
Pfam:
Sel1
TPR_16
Motif
Other DBs
NCBI-GeneID:
121970951
NCBI-ProteinID:
XP_042377920
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Position
4A:complement(124491370..124498749)
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AA seq
675 aa
AA seq
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MRRAAISCVAVLLLCHALLASSLRPRQFVYVFANEHLSESSSASSAAGEGSEGTEGSDEW
DEFGDSESLPDVDYDQGSWLPFLESPSLLDDPSSDAREVQYASGVRHLISAASSGDSSDM
EAAAAEIEASASRGYPHAQSALGFLYGTGLMRAHSRSKSLLYHHFAAEGGNLQSKMVLAY
NYLRQEVHEKALELYSELAEAAITSFLILEESPVIEHIRIHSGTEENQEDLRKSRGEADE
NFQITEYQALKGDSAAMYQIGLLYYYGLRGVKRDLTRALDWFSKAVEKQNPKAMELLGEM
YARGAGVERNYTKAFRWLSLASKHKYYSAYNGLGYLYVKGYGVEKKNYTKAREYFEKAAE
NKVPGGFYNLGVLYLKGIGVKRNITKACKLLLIAAETGQPKAIYRVARLSHKGIGFKKDL
HMATLLYKAVAERGPWGSLLRWALESYLKGDVGKSLLLYSRMAELGYEVAQSNAAWILDK
FREQSICMGESGFCSDAERHTRAHSLWWQASEQGNEHAALLVGDAYYYGRGTNRDFERAA
EAYMHARSQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQALERDAAAAMPVKLALMSL
WIRMNYADSFMVKVIDSLPELYPKLELWVEEVLMDEGNATILTLFACLLAVLYLRERQRR
QAVPVAPHQPDIFLN
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcgctgcaattagctgcgtcgccgtcctcctcctttgtcacgctctcctcgct
tcatctctccgccctcgccagttcgtttacgtcttcgccaacgaacacttatccgaatcg
tcttccgcctcgtcggccgccggcgaaggatcagagggaaccgagggatccgacgagtgg
gatgagttcggcgactcggagtcgctcccggacgtcgattacgaccaaggatcgtggctc
cctttcctcgagtcgccgtctcttctggatgacccctcgtctgatgcccgtgaagtccaa
tatgcatccggagtccgtcacttgatctccgccgcttcctctggtgactcttccgacatg
gaggctgccgccgccgaaatcgaagcctctgcctcccgaggctacccgcacgcgcaatcc
gccctcggttttctatatggcaccggtctcatgcgtgcccacagccgctccaagtccttg
ctctaccaccattttgccgccgagggcggcaatctgcagtccaagatggttctcgcctac
aactatttacggcaagaggtgcatgagaaagcgctggagctttattccgaacttgcagag
gcagcgatcacgagcttcctgatattggaggagtcgcctgtgatagaacacatccggatc
cacagcggtaccgaggagaaccaggaggatttaaggaaatcaagaggggaagcggatgag
aatttccaaatcacggagtatcaagcattgaagggtgattctgctgccatgtaccagatt
ggcttgttgtattactatgggttgaggggagtgaagagagacctcactagggctttggat
tggttttcaaaggccgtggagaagcaaaatccaaaagcaatggaattgcttggagagatg
tatgccagaggagctggagtggagaggaattatactaaggccttcagatggctctctctt
gcatccaaacataagtattactcagcatataatggcttgggatacctctacgttaaaggt
tacggtgtagagaaaaagaactacactaaggcaagagaatattttgaaaaagctgctgaa
aataaggtgcctggtggattctataacctaggtgtgctgtatctcaagggaattggtgtg
aagaggaatataacaaaagcatgcaaattacttcttattgcagctgaaactggtcaacca
aaggccatctaccgagttgcaaggttatctcataaaggcataggctttaagaaggatctc
catatggccacacttctctacaaggcagtggcagaaaggggaccttggggctccctgtta
agatgggctctcgagtcatatcttaaaggtgatgtagggaaatcacttttgttgtattca
agaatggcagagctaggatatgaagtggctcaaagcaatgcagcttggatcctcgacaaa
ttcagggaacaaagtatttgcatgggtgaatctggcttttgttcagatgcagaaaggcat
acccgtgcacactcattgtggtggcaggcatcagagcaggggaacgaacatgcagctttg
ttggttggcgacgcatactactatggccgggggacaaatagagactttgaacgtgctgct
gaggcatacatgcatgctcggtcacaatccaatgcgcaagccatgttcaatctgggatac
atgcatgagcatggtcagggacttcctcttgatcttcatctagctaaaaggtactacgat
caggcccttgagcgtgatgcagctgctgcgatgcctgttaaactagcacttatgagctta
tggataaggatgaactatgctgacagtttcatggttaaggtgattgattcactcccagaa
ttgtacccaaaattagagttatgggtggaggaggtgctcatggatgaaggaaatgcaaca
atattaactctttttgcttgtctcctggctgtactttatctccgagaacgccagaggcgg
caagccgtgcctgtggcaccacatcaaccggatatttttctcaactag
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