Zingiber officinale (ginger): 121970983
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Entry
121970983 CDS
T08725
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121970983
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121970983
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
121970983
NCBI-ProteinID:
XP_042377953
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Position
4A:125137159..125144057
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AA seq
660 aa
AA seq
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MDEKRYAKQTSGNFRKRPRDQFDNGKRKKHNSNRDHGSTNKPIDTIYRILCPVKKIGSVL
GKGGDIVNALRDETHAKIRVADAITGADERVIIIFNYPSQSEENNPGQDTENSDKNDLED
MLPHCPAQDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNI
IQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENP
SLEDIIYASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNSYPDEPSRYPSG
SFSRNSFQEGEMAEEFSMRILCATVKIGGVIGKGGTNIRQLEQQTGARIQVEDTAPDAEE
RVINISCKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSKVGCILGQGGDVI
TEMRRRTRADIRVYSKDDKPKYTSANEELVQISGPRDFAWDALVEIASRLRARTFRSGNS
SANPAPAGPFRGVPPFERIPHRGAPSAGNADLGSARPGHFRGYITERYPDRGISSSSMFE
SEKSVGYDYRKAYGQSYEAPYYHSPAAAGYTNYNAPAEPKIPYGGAPSVGRADISNFDIR
QAPGARVKSHNPMLGVPENVMDMHGPSEYSRPGQGGHLPPPYMSSGSQGILPSQQSIRPY
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaagaggtatgcaaagcaaacatcaggaaatttcaggaaacggccccgtgat
caatttgataatgggaaacgaaagaaacacaattctaaccgtgatcatggttctactaat
aaacctattgatacaatttaccgcatcctttgccctgttaaaaagattggtagtgttctg
ggtaaaggaggtgatattgttaacgcccttagagatgagacccatgcaaaaataagggtt
gcagatgctattaccggtgcagacgagagagtaattattatttttaattacccatcccaa
tctgaagaaaacaatcctggtcaggatactgaaaatagtgataaaaatgacctagaggac
atgctaccccactgtcctgctcaggatgctttactcaagattcatgacaggattgctgca
gatgagattttacgtggtggtgtcgtgcaagagagaactgaatctgatgatattgttact
gctcgaattttggtcccaaaaaatcaagttggatgccttcttggcaagggtggaaatatt
attcagcaactgcgaacaaatactggtgcaaatattcgcatattgcctcctgatcacctt
cctccatgtgccatgggcagtgatgagctagtacaggtatcaggagtgccatctattgca
aagaaggctctatacagaatatcagctttgctgcatcagcatcctaataaagaaaatccg
tctttggaagatatcatatatgccagtacccgaggttcttatcgttcagattcatctatc
ccagctccattgcctcagggaaatcgagtgtggtctccgtattactctgatgtccgtgat
ccatcaacagtctcaagattcaacagctatccagatgagccatcgagatatccttctggt
agttttagcagaaacagtttccaggagggtgaaatggcagaagaattttccatgagaatt
ttgtgtgctactgtgaagattggtggagtgattggcaagggtgggaccaatatcagacaa
ttagagcaacaaacaggtgctcgtattcaggttgaggatactgcacctgatgctgaagaa
cgtgtgatcaatatttcatgcaaggaggttccatgggagacaagatctcctacaatcgaa
gctgctcttcagattcaaaataagacaagttcgaactctgatgatgatgctatcacaaca
cggcttcttgtcccatcaagtaaagttggttgcatacttggacaaggaggtgacgtcata
acagaaatgagaagacgaactagagcagacattcgtgtttattccaaggacgacaagcca
aaatatacatctgcaaatgaagaactagtacagatttctggacctagagattttgcttgg
gatgcacttgtggagattgcttcaaggcttagagcaagaacttttcgaagtgggaattct
tctgctaaccctgcacctgcaggtccttttcgtggggttcctccttttgaaagaattcct
catcgaggtgcaccatcagctggaaatgcagatttgggttctgcacgacctggtcatttt
cgtggttatattactgaaagatatcctgatagaggaatttcatcatctagcatgtttgaa
tctgagaaatctgttgggtatgattaccggaaggcttacggacaatcatatgaagctcca
tactaccattcaccagctgctgctgggtacactaattacaatgcccctgctgaacctaag
attccttatggtggggccccttcagttggcagagctgatataagcaattttgatattcgt
caggcccctggagcgagagtcaaatcgcacaatcctatgttgggtgttccggagaatgtc
atggacatgcacggtccttcagaatattcaaggccaggacagggcggccatcttccacca
ccctatatgtcttccggaagccagggcatactgccgtctcaacaatcaattcgcccgtac
tag
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