Zingiber officinale (ginger): 121970992
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Entry
121970992 CDS
T08725
Name
(RefSeq) myosin-6-like isoform X1
KO
K10357
myosin V
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121970992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
121970992
04131 Membrane trafficking [BR:
zof04131
]
121970992
03029 Mitochondrial biogenesis [BR:
zof03029
]
121970992
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
121970992
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121970992
mRNA cycle factors
P-body specific factors
121970992
Membrane trafficking [BR:
zof04131
]
Others
Actin-binding proteins
Myosins
121970992
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121970992
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121970992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
DUF7310
AAA_22
ABC_tran
AAA_lid_6
AAA_16
CbiA
DUF1664
Motif
Other DBs
NCBI-GeneID:
121970992
NCBI-ProteinID:
XP_042377972
LinkDB
All DBs
Position
4A:complement(125299857..125329190)
Genome browser
AA seq
1514 aa
AA seq
DB search
MANLSNPTVGSQVWTEDPEEAWIDGEVVEVNGDEVTITCTSGKTVTAKLNNVFPKDTDVS
PCGVDDMTKLAYLHEPGVLLNLKSRFMMNEIYTYTGNILIAMNPFQRLPHLYSTHMMEQY
KGADFGELAPHPFAIADAAYRRMMIDGISQAILVSGESGAGKTESTKMLMRFLAHMGGKV
ATDARSVEQQILESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDEKARISGAAVRTYLLE
RSRVCQISDPERNYHCFYMLCAAPSEDIDKYKLDHPRTFHYLNQSNCFALDGVDESKEYL
TTRRAMDVVGISTDEQDAIFSVVAAILHLGNIEFAEGEEPDSSVPKDDKSWYHLRTAAEL
FMCNEKALEDSLCKRIIITRGDRITKNLNPEAATLSRDALAKVVYSRLFDWLVDKINCSI
GQDPDSKILIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEID
WSYIEFIDNQDILDLIEKKPGGIIALLDEACMLPRSTHETFAEKLYQTFKNHQRFIKPKF
SRSDFTIRHYAGDVTYQTELFLDKNKDYVVAEHQELLGASRCPFVAGLFPSLTEDSSKSS
KFSSIGLRCKQQLQTLLETLSHTEPHYIRCVKPNNLLRPAIFENTNILQQLRCGGVLEAI
RISCAGYPTRRTFDEFVDRFGIFAPNLLDESRNFDEVTVTKKLLEKVGLKGYQIGKTKVF
LRAGQMAELDARRNEVLGLSAKKIQRKVRSYLARKHFILLQKSAILLQTACRGYNACRHY
EKMRRQAAASIIQAYFRMHLARKMYTNNCLASITIQSGLRGMVAHKEFHYRKQTRAAIII
QSYFRRHLACLCYLRLKKATITMQCAWRGRVARRELRKLKLAAKEAGALQEAKNKLEKQV
EELTWRLQLEKRMRLDLEEARSQEITKLQVALQDMQLQVKETKTMLAAEQEASKKTAENA
SLVHEVQVIDTDLTNKITAENEKLKALVSSLETKIQETEQKFEETSALSEERLKKILETE
SKIDESEAKLIDLKTSMQSLQEKLSNMESENQVLRQQALILASVKNTPSTPSKQSMDNLP
HQFMDHKDLPNAPPPIKHIAKTDSRLRKSYVDRPQENVDMLIKCVVQNIGFDEGKPAAAV
TIYKSLLHWKLFEAEKTSVFDRLIQMIGCAIEDDQSTEHLAYWLSNSSTLLYLLQKSLKA
AGATSSTPRGKPPTPTSLFGRMTQGFRSSSNIPVDELAFVRQVEAKYPALLFKQQLSAYA
EKIFGILRDNAKKELSSLISQCIQVTRTVRAKSMLRGRSFGSNAQNSPWQSIIDNLDNLL
AVLQGNYVPEILIQKFFVQVFFFINIQLFNSLLLRRECCSFSNGEYVKSGLDEMELWCNK
LKPELVGSSSDELKHTKQAIGFLVIFQKYRISYDEIVNDLCPALTVQQLYRICTQYYDDK
YNSQSVSPTVLSDMSKLMVNDSADDDEATFLLDDDLSIPFSLDEISTSVHDKDLLDVKPP
EELIKYTAFQFLLD
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcttagcaatcctacagtagggtcacaagtatggactgaggatcctgaagag
gcttggattgatggggaggtcgtggaggtcaacggagatgaagtcacgatcacctgtact
tctggaaagacagttacggcaaaattgaacaatgtgtttccaaaagataccgatgtatca
ccttgtggtgtcgatgacatgacaaagctagcttatcttcatgaaccaggtgtcttgctg
aacttaaagtcaagatttatgatgaatgaaatatatacatatactgggaatatactgatt
gctatgaacccttttcaaagactgccacacctatacagtacccacatgatggaacagtat
aaaggggcagattttggtgaattagctccccatccttttgcaattgccgatgctgcatat
agacgcatgatgattgatggaataagccaggcaatattagtaagtggagaaagtggtgct
ggaaaaacagaaagcactaagatgcttatgcgctttcttgctcatatgggtggtaaagtg
gcaactgatgcacggtctgtcgagcaacaaattttggagtccaatcctgtgcttgaggca
tttggcaacgcaaagacagtacggaataataattccagtcgttttggaaagtttgttgag
atccagtttgatgaaaaagcaaggatttcaggagctgctgtcagaacatacttgcttgaa
agatctcgtgtctgtcaaatatctgatcctgagagaaactaccactgtttttacatgcta
tgtgctgctccatctgaggacattgataaatacaaattggaccatcctagaacgtttcac
taccttaatcagtccaattgctttgcacttgatggggtagatgagtcaaaggagtactta
acaactagaagagccatggatgttgttggaattagcactgatgaacaggatgcaattttc
agtgtggtggctgccattcttcaccttggaaatattgaatttgctgaaggagaagaacct
gattcatctgtacctaaagacgataaatcttggtaccatctaagaactgctgcagagctt
ttcatgtgtaatgagaaagctcttgaggattccttgtgtaaaaggattatcataactcgt
ggtgatcgcattaccaaaaatctaaatcctgaagctgcaactcttagccgagatgctttg
gcaaaggttgtctactcacggttgtttgattggcttgtggataaaatcaactgctcaatt
ggccaagatcctgattcaaagattttgattggggtgctggatatttatggatttgaaagt
ttcaagacaaacagttttgaacagttttgcatcaatcttactaatgaaaaactgcaacaa
cattttaatcagcatgtttttaagatggaacaagaagaatatacaaaagaagaaattgat
tggagttatatcgaatttattgacaatcaggatattcttgatcttattgagaagaaacca
ggtggaataattgctcttctagatgaagcttgtatgttgccaaggtcaacacatgaaaca
tttgctgagaagttgtaccaaacatttaagaatcaccagcgattcatcaaacctaaattt
tcacgctccgactttaccatccgtcattatgctggcgatgttacatatcaaacagaactt
ttcttggataagaacaaagattatgttgttgctgaacaccaagaactcttgggtgcttca
aggtgtccctttgttgcaggtcttttcccatcacttacagaggactcatctaagtcttcg
aagttctcatcaattggcttaaggtgtaagcaacaacttcaaactttattagaaactcta
agccatactgagccccactacatacgatgtgtaaagcctaataatcttctgagacctgca
atttttgagaacactaatattctccagcagcttcgttgtgggggtgtgttggaggcaatc
agaataagctgcgctggatatcccacacgacgcacattcgatgaatttgtagatcgattt
ggcatttttgcgcccaatttattggatgagagtaggaattttgatgaggtgactgttact
aagaaattgttagagaaagtgggtctcaaaggttatcagataggcaaaacaaaggtgttt
cttcgtgctggtcagatggctgaattagatgctcgtaggaatgaagttcttggactctct
gctaagaaaattcaaaggaaagttcgatcctatttggctcgcaaacatttcatcttactc
caaaaatcagctatactgttacagactgcatgcagaggttacaatgcatgtcgacattat
gaaaagatgcgtaggcaagctgctgcctcaataatccaggcatattttcgcatgcacctt
gcaaggaaaatgtacaccaacaactgtcttgcatctattaccattcaatctggtttacgt
gggatggttgctcataaagaatttcattataggaaacagacaagagctgcaataattatt
cagagttatttccgcagacacttagcgtgcttgtgttatttgagactaaagaaagcaaca
attacgatgcaatgtgcttggagaggaagagttgctagaagggaactacgaaaacttaaa
ttggctgcaaaagaagccggtgcactccaagaagctaaaaataagttagagaagcaagtt
gaagaactcacatggagactacagctggagaaacgaatgaggcttgacctggaggaagca
aggtctcaagaaattacaaagttgcaagtagccttgcaggatatgcaactacaggttaaa
gaaacaaaaactatgcttgcagcagagcaagaagcttccaagaagactgcagaaaatgct
tctttggtacatgaggtccaagttattgatacagatttgacgaataaaatcacagctgaa
aatgaaaaattaaaggctttggtgagttctcttgaaacaaaaattcaagaaacagagcaa
aagtttgaggaaacaagtgccctaagtgaggagaggctaaagaaaattcttgagacagaa
tcgaagattgatgagtcagaagcaaaattaattgatctgaaaacatcaatgcaaagtctt
caagaaaagttgtccaatatggaatctgagaatcaagtactgcgacagcaagccttaatc
cttgcatcagtcaaaaacacaccctctaccccatcgaaacaaagtatggacaaccttccg
caccaatttatggatcataaggacctaccaaacgctcctcctcctattaaacacattgcc
aagactgattccaggttgaggaaatcttatgttgacaggccgcaggagaatgttgacatg
ctgatcaaatgcgtggttcaaaacattggttttgatgaaggaaagccagcagctgcagtg
actatatacaaatctcttcttcactggaaattatttgaagcagagaaaacaagtgttttt
gaccgtcttattcagatgattggctgtgcaattgaggatgatcagagcaccgaacaccta
gcttattggttgtcaaattcatctactttgttatatctcttgcaaaagagtctaaaagct
gctggtgcaactagttctacaccacgagggaagcctccaacaccaacatcattatttggg
cggatgacacaagggttccgctcttcttcaaacattcctgtggatgaacttgcttttgtg
cgccaagtagaggccaaatacccagcattgctgttcaagcaacagctctcagcttatgct
gaaaaaatttttgggatccttcgtgataatgcaaagaaagagttgagctcattaatttca
cagtgtatacaggtaactaggacagtaagagcaaaaagtatgctgagagggcgttcattt
ggaagtaatgctcagaacagcccgtggcaaagcatcatcgacaatcttgataatctcctg
gcagtgttgcaagggaactatgtacccgagattcttattcagaagttctttgttcaagtc
ttcttcttcattaatattcaactttttaatagtcttctcttgcgccgagaatgttgctcc
tttagcaacggagagtatgtgaaatctggtttggatgaaatggaattgtggtgtaataaa
ttaaaaccagagcttgttggatcatcctcggatgaactgaagcacacaaaacaagctatt
ggtttcttggtaatattccagaagtataggatttcatacgatgagatagtcaatgatctc
tgcccggcgctgactgtccaacagctgtacagaatttgcacccaatattatgatgacaaa
tacaatagtcaaagtgtttcaccaactgtactttctgacatgagtaaactcatggtaaat
gattccgcagacgacgatgaagctacatttttgctggatgatgatctgagcattcccttc
tcactggatgaaatttcaacctctgtacatgataaagatttactcgacgtcaaaccaccc
gaggaactcatcaaatatacagcattccaattcttactagattaa
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integrated database retrieval system
