Zingiber officinale (ginger): 121971007
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Entry
121971007 CDS
T08725
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121971007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121971007
03051 Proteasome [BR:
zof03051
]
121971007
Membrane trafficking [BR:
zof04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
121971007
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121971007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ddi2_HDD
Rad60-SLD_2
Dsc3_N
Med15_fungi
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
121971007
NCBI-ProteinID:
XP_042377992
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Position
4A:complement(125952984..125958355)
Genome browser
AA seq
533 aa
AA seq
DB search
MAAEGESGGAAPASATIHIRCSNGSKFSVQAALDGTVGAFKAVVAGICDVPTEQQRLIYK
GRILKDDHTLASYGVESDHTIHLVRGAASSAAPTDKAVNNQGASRTTNSSPSSTPGGSMF
PGLNVNGLSGSGTAGLLGTGIPELDQMQQQLSQNPNMMREIMNLPAMQNLISNPDIIRNL
FMNNPQMREIIDRNPELAHVLNDPSTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEG
FNMLRRMYETVQEPFLNATTMGGDLGGDMGSNPFAALLGNQGAGRVRESPADSARSPEPT
TGTVPNANPLPNPWGTNTGGSQPVNTRSTATSAPATPGLNGLGSLDFENMAGRMQDPSML
SQVLQNPAMMQMMQNLLSDPQYVNQMLNSNPNVRSLLESNTQLREMMQNPDFIRQLMSPE
TMQQLLSFQQSLFSHIGRQQSTPEQEQTGRGTGNSTQSNTGLEFLMNMFGGLGAGGLGIP
NPSNVPPEELYATQLSQLQEMGFYDTQENIRALTATAGNIHAAVERLLGNLGQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgagggcgagtccggcggcgccgcgcctgcctccgccaccatccacatccga
tgctccaacggctccaagttctccgtgcaggcagcgctcgacgggacggtgggcgcgttc
aaggccgtcgtcgcgggcatctgcgacgtgccgacagaacagcagcgcctgatttacaaa
ggaaggatcttgaaggacgaccatacgctcgcgagctacggtgttgaatcagatcatacc
attcacttggttcgtggtgctgcttcatcagctgcaccaactgataaagctgtgaataac
caaggagcctcgagaacaacgaacagtagtccgtcatccactccgggaggttccatgttc
ccaggcctgaatgttaatgggttatctggtagtggaacagctggtttattgggaactgga
attccagagcttgatcagatgcagcagcagcttagtcagaacccaaacatgatgagggaa
attatgaatttgcctgccatgcagaacctcattagcaatccggatataatccgcaatctt
tttatgaacaatcctcaaatgcgtgaaattattgaccgcaatcctgagctcgcgcatgtt
ctcaatgacccgagtactctaaggcagacccttgaggcagcaaggaatcctgaactcatg
agggaaatgatgcgtaacacagacagggcgatgagcaatattgaatcatctcctgaagga
ttcaacatgctacgacgcatgtatgaaactgttcaggagccatttcttaatgcaaccact
atgggaggagacttagggggtgacatgggatccaacccatttgctgctcttcttggaaat
caaggtgctggacgtgtcagagagtctccagcagactcagctcgtagtccagagccaaca
actggaactgtacctaatgccaatcctctccctaacccttggggcaccaacactggaggg
tcacagccagtcaatacaagatcaactgctacaagtgcaccagcaactcctggcttaaat
ggtcttggttctctggattttgaaaatatggctggtaggatgcaggatccctccatgtta
agtcaggttttgcaaaatcctgccatgatgcagatgatgcaaaatctcctttctgatcct
cagtatgttaaccagatgcttaattccaaccctaatgtacgtagtttattggaatccaac
actcagttaagagagatgatgcaaaatccagattttattcgccagcttatgtcacctgaa
acaatgcagcaacttttatcttttcaacaatctctgttctcccacattggacggcagcag
tcaaccccggaacaagagcagacaggtcggggtactggcaacagcacgcaaagcaacacg
ggactggaattcctgatgaacatgtttggtgggcttggtgcaggaggtcttgggatcccc
aatccttcaaatgtacctccagaagaactttatgcgactcaattgtcccagcttcaagaa
atgggattttacgacactcaggagaatatccgtgcgctaactgccactgcagggaacatc
catgctgccgtcgagcgactccttgggaatctcgggcagtaa
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