Zingiber officinale (ginger): 121971022
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Entry
121971022 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121971022
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121971022
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
121971022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
Prok-RING_4
zf-rbx1
zf-C3HC4_5
zf-RING_6
TPR_MLP1_2
DUF7129
YwqJ-deaminase
zf-ANAPC11
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
121971022
NCBI-ProteinID:
XP_042378023
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All DBs
Position
4A:complement(126216129..126230274)
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AA seq
879 aa
AA seq
DB search
MGSTGEPERKRRHFGPISPTSAGATKKQPFSPRSDDKKLDVAVLKYKNQKLSEQLEAQKF
EYLALGNKFHQFKEKQKTHEDTLLLVNNNWERLLCDLDSLSTSASGSTCAYHLKHSHLSN
DGASFSIEEDFLRRLLETGATECSENASPTSNQDDVQATPLATKSILKNLLSLLNGVWHV
NEVFSAACLSTIPEDEPGRKLLKIIQDLEVEVRNFLMAVGDLHLKHRSVADDLLNHQDVD
LINKAECKRLAEELASTVAELEESNCRISKLKLHKGTTQNSHFLFPNFGNKQVARDKVKD
AKKDMQYMESSLKELTVLVSSRLEDIKKLHEERIDILRKIADMRNALMDFKKISSSKTFV
LLSDHLKTSKEEMDQCRVSLEKLQVEKDSFIWWEKEVNWKHEIADIGRTISFLSESRIAE
LEQSLRKLADERVMLESKLEAATRGSSRKEIIQEFKALVASLPKSMEIVQNEIDQKKEAT
INLHSLRAEVQCLSSMLHRKENEIKTLFNNSSQQLSEIKQLHTTVQDLRDTNYELKLFLE
MYRRESTDSRDLIVSKDNEYEAWAHVHTLKSSLDEHNLELRVKAAIEAEATSLKMLTSAE
AEIDELRQMLETCERDMSRLSEILKSKHEEGRTYLSEIECIGQSYEDMQTQNQHLLHQII
ERDDYNIKLVMEGVKEKQMQEALRLEIQTMNRKLQQAKLLMDSYDLKASKMDEQLKMWSE
QVGKLAEDARQGGATFEHTKKRLLDAQMEAQKLRQLLDGVQDKVEGSRLEVANLLIEIEK
ERYNKKRTEESLEVMTRKAASLRAQTKGSVLEKLRQEVKEYRGILKCSICLDRQKEVVIA
KCYHLFCHQCVQRTVSNRQRKCPTCGASFSPNDVKPIYI
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcaccggggagccagagaggaagcgacggcatttcgggcccatatctcccact
agcgccggtgccaccaagaagcagcctttttcacctcgctctgatgacaagaagcttgat
gttgctgtgttgaaatacaagaatcagaagctttctgaacaattagaagctcagaaattt
gagtatcttgctcttggaaataaatttcatcagttcaaagagaaacagaagacacatgag
gacacgctacttttggtaaataataactgggagcggcttctctgtgacctggactcactt
tctacctcagcaagtggatctacatgtgcttatcacttgaaacactctcatttgtccaat
gatggagcatccttctccatagaggaagatttcttgaggagacttttggaaacaggtgca
actgaatgttctgagaatgcatctcctacatctaaccaggatgatgtacaagcaacacct
ttggcaacaaaaagcatcttgaagaatcttttaagtttactcaatggtgtatggcatgta
aatgaggtgttttctgctgcttgcctttcaactatacctgaagatgaacctggcagaaaa
ttgctgaaaattattcaagaccttgaggtagaggttagaaactttctcatggctgtaggt
gatcttcatttaaaacatagatcagtggcagatgacctcctaaaccatcaagatgtagat
ttgataaataaggctgaatgcaaacgactagcagaggagttggccagtacagttgctgaa
ttggaagaaagcaattgtaggatatcaaagctaaagttgcataaaggcacaacacaaaat
tcacatttccttttccctaattttggaaacaaacaagttgctagagataaggtgaaggat
gcaaaaaaggatatgcaatatatggaatcttccctcaaagaattgacggttctggtttca
agccggttggaggacataaagaaattgcatgaagaaagaattgatattctaaggaaaata
gctgatatgcggaatgctttgatggatttcaagaagatatcgtcatccaagacttttgtg
ttgctgagtgaccacctgaagacatcaaaggaagaaatggatcagtgccgggtttcactt
gagaaattgcaggttgaaaaagacagctttatatggtgggaaaaggaggtgaattggaaa
catgagatagctgatattggtaggacaatctcttttctttccgagtctagaattgccgaa
ctagagcagagtctgcggaaattggctgatgaaagggttatgttagagtccaaacttgaa
gcagccacaagaggatcaagtaggaaagagataattcaagaattcaaggcacttgttgca
tcactgcctaaaagcatggagatcgtgcaaaatgaaattgatcaaaaaaaggaagctact
atcaaccttcattctctgagagcagaagtgcaatgcctttctagtatgttgcataggaag
gagaacgagattaaaactttattcaataattcttctcaacaactttctgaaataaagcag
ctgcatacaactgtccaagatttgagagatactaactatgaattgaagctattcctagag
atgtatagacgtgaatctactgattccagggatctcatagtatccaaagacaatgaatat
gaagcatgggctcatgtccatactctcaaatcatctcttgatgaacacaacttggaattg
cgtgttaaggcagccattgaagctgaagcaacatctctaaagatgctaacttctgctgaa
gctgagattgatgaattgaggcagatgttggaaacatgtgagagggatatgtctaggttg
tctgagattctgaaatcaaaacacgaggaaggaagaacatatttatccgaaattgagtgt
attggacaatcatacgaagatatgcaaactcaaaaccaacacttgttgcaccagattata
gagagagacgactacaacatcaaacttgtgatggagggcgtgaaagagaagcaaatgcag
gaagcacttcgtttggaaatacaaactatgaacagaaagctacaacaagccaaactgttg
atggattcatatgacctgaaggcttcgaaaatggatgaacagctgaagatgtggtcagag
caagtggggaaacttgctgaggatgctcgacagggtggagccacttttgagcacaccaag
aaaaggctattggatgcacagatggaggctcaaaaattgagacaattactcgacggtgtt
caagacaaggttgagggaagccgactagaggtagcaaatttgctgatagaaatagagaaa
gagaggtacaacaagaagagaactgaggaaagtttagaagtcatgacgaggaaagctgcc
tctctcagggcacaaactaagggttctgtcctggagaaacttcggcaagaagtaaaagaa
tataggggaatcctcaaatgcagtatctgccttgatcggcaaaaggaggttgtgattgca
aaatgctaccatttattctgccatcagtgtgtccaaagaacagttagcaaccgtcagcgc
aagtgcccaacttgcggggcgagtttcagcccaaacgatgtcaagccaatctacatttga
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