Zingiber officinale (ginger): 121971207
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Entry
121971207 CDS
T08725
Name
(RefSeq) vacuolar-sorting protein BRO1-like
KO
K12200
programmed cell death 6-interacting protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03250
Viral life cycle - HIV-1
zof03272
Virion - Hepatitis viruses
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121971207
03272 Virion - Hepatitis viruses
121971207
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121971207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121971207
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121971207
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
121971207
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
121971207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
ABATE
Motif
Other DBs
NCBI-GeneID:
121971207
NCBI-ProteinID:
XP_042378292
LinkDB
All DBs
Position
4A:130544895..130553179
Genome browser
AA seq
809 aa
AA seq
DB search
MTTGNSTLAVPDKKTTVVDLYRPLRHYIAVTYGEREAQEAEDDLNAVRRLRLDLEKPIEA
VASDLRRDLLLNYYRALASIEPRFPISPDPAHVHSLTFTWFDAFKPSKKVAQTSIHLEKA
AVIFNLGAVYSQIALSANRTDAAGLKQACNAFQSAAGAFAYLRDNAAARVSSTGGVTVDL
SVECAWMLEKLMLAQAQECFFEKVIGDAKPPTLCSKVARQVGLYYEEAHAALNLPPLNQH
FDRSWIAHVQSKAAQFYAEASYRCSLDLHDKEEIAEEICRLRTAINALADAKKYSRGAAP
PLLDAVNKLETKMTSNLERAIKENEQVYLMRVPDASSLAALPAASLVKSMPLAEVLDASK
EGLFSRLVPDNNTKALSKYTDIVDDIIRMQAEKLQQASEIARVRLKEMDLPDSILALEGS
FDLPLDLKEDVEALQIRGGPAGLESELQQLKDLRRVNQELCIEIEELLNKEADEDAHFRS
QFGTKWNIPQSSILTKGLQDRLNKFAANIKQAINSDSRIERAVRDNSSLMAILDNKPIES
AIPNLARPIMSLDGNEDAIVGALKQSLRQIENLGVQRAGLEDMLKEMKRKDDILPKMMAN
TGSQEDLFKKEISKYDQICEEIVQNIEEQDQLLLQIQAQNDEFSVVFNLEDYKAAREKSF
KQISTAIAKYHEIKENINEGLNFYVTLQDAVTIIKQQCSDFVMTRNIQCREMVENLQRQS
NTYPQSAPQSAPPHAEQPRPGYSHLYTSYATPQQTNPYLIPSGQYQPSLQQPNRPTAYPG
WRGSYYPPQLQESPSPYPPPNQGSYYRPQ
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggggaactcgacgctggctgtgccggacaagaagacaaccgtcgttgacctc
taccgcccgctccgccactacatcgccgtcacgtacggcgagcgagaggcccaggaggca
gaggacgacctcaacgccgtccggcggctccgcctcgacctcgaaaagcccatcgaagcc
gtcgcctccgatctccgtcgcgatctcctcctcaactactaccgcgccctcgcctccatc
gagccccgcttccccatatcccccgaccccgctcacgtccactccctcaccttcacctgg
ttcgacgccttcaagccctccaagaaggttgcgcagacgtccatacacctcgagaaggcg
gcagtcattttcaatctaggcgccgtctacagccagatcgccctatcggcgaaccgcaca
gacgctgcgggcctcaagcaggcctgcaacgcttttcagagcgcggcaggggcgtttgcc
tatcttcgcgataacgcggctgctagggtttcttccaccggtggggtaaccgttgatctc
tcggtggaatgcgcctggatgctggagaagctaatgctggcgcaggcacaggaatgcttc
tttgagaaggttattggggatgcgaagcccccaacactctgctcgaaagtcgcgcgccag
gttggcctctactacgaggaagctcatgctgcgctcaatttgccaccactcaaccagcac
tttgatcggtcttggattgctcatgtgcaatctaaggcagcacaattttatgcagaagct
agctatagatgctctttggatcttcatgataaggaagaaattgcagaagagatttgtcgg
ttgaggactgcaataaatgcccttgctgatgccaagaaatattcaaggggtgctgcccca
cctttgctagatgctgttaacaaactggagaccaaaatgaccagtaacctggagagagct
attaaggagaacgaacaggtttatctcatgcgggttccagatgcaagttctttggctgct
ttgcctgcagcctctcttgtcaagtcaatgccattggcagaagttttagatgctagcaag
gagggactattctcaaggcttgttccagacaacaacaccaaggctctctctaagtacact
gacattgttgatgacattattcggatgcaagcagagaagttacagcaagccagtgagata
gcaagagttagactcaaagaaatggacctacctgattctatcttagcattggaaggtagc
tttgatttgcccttggatctcaaggaggatgttgaagctcttcagatcagaggtggtccc
gctgggttggaatctgagttacaacaactcaaagatttgaggagagttaatcaggagctc
tgtattgagattgaagagttactcaacaaggaagctgatgaggatgcacattttcgatcc
caatttggtacaaagtggaatatacctcaatcaagtatcctaacaaagggtttgcaggac
agactgaacaaatttgctgcaaacattaagcaagctatcaatagtgattcaaggatagag
agggctgtcagagacaattccagcctgatggcaatcctcgacaacaagccgattgaatcc
gcaattccaaatcttgcaaggccgataatgtctcttgatggcaatgaagatgctatagta
ggagcactgaaacaaagcttgaggcaaatagagaatctaggtgttcagagggctggtctg
gaagatatgttaaaagagatgaagagaaaggatgatatactaccaaagatgatggcaaac
actggatcacaagaagacctctttaagaaggagatatctaagtacgatcaaatttgtgaa
gaaattgttcaaaatattgaggaacaggaccaactgttgcttcaaatacaggcacaaaat
gatgagttctctgttgtgtttaatcttgaagactacaaagctgctcgcgagaagagcttc
aaacagatctctactgcaatagcaaaatatcacgaaatcaaggagaatatcaatgagggt
ttgaacttttatgttacacttcaggatgcagtaacaattataaaacagcaatgcagcgat
ttcgtgatgaccagaaacattcagtgccgagaaatggttgagaatctccagaggcagtcc
aatacttatccacaatctgctcctcagagtgctccaccgcatgctgagcaacctcgacct
ggttattctcatctctatacatcttatgcaacaccccagcagaccaacccctacctcatt
cccagtggccagtatcagccttctctacagcagcccaaccggccaactgcataccctggg
tggcgcggatcttactatccgcctcagctgcaggagagtccatctccttatccaccaccg
aatcagggaagctactacagacctcagtga
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integrated database retrieval system
