Zingiber officinale (ginger): 121971373
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Entry
121971373 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121971373
04121 Ubiquitin system [BR:
zof04121
]
121971373
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121971373
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121971373
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121971373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_10
Rad50_zn_hook
Zf_2nd_IFT121
zf-Nse
zf-RING_6
Prok-RING_4
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
121971373
NCBI-ProteinID:
XP_042378550
LinkDB
All DBs
Position
1B:complement(108790754..108798431)
Genome browser
AA seq
358 aa
AA seq
DB search
MSSAGSHGGGAAADSEYQNYYCHRCQRTVALPTAAFEIVCPVCHDGFLEEVESPNPSPSP
NTFSYDSSGNPVLLQPFGPSFFFSSSSSSPAPASLDLRNPADLADLLGPDLFVSRSGPGG
PTSATSAVPFNPMIFLQDYLQQLMSGGANIQVVVEGGPGGGIGNLGDYFIGPGLEQLIQQ
LTENDPNRYGTPPAAKSVVANLPDIKISLELLASDEAQCSVCMDTFEMGNEAKQMPCKHI
FHKNCILPWLELHNSCPVCRYELPTDDLDYEQRRGTPAVPSPRTTAGTRDSSGVGAAAGA
FTEGDSGSPRMIERRFRISLPWPFRMFEAQAEGSNAGSGGNDGNNSTNPHPDRQEDGR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgccggtagccatggaggtggtgccgccgccgactctgagtaccagaactac
tactgccaccggtgccagcgtactgtcgcccttcccactgctgccttcgagatcgtctgc
cccgtctgccacgatggcttcctcgaagaggtagaatcccctaaccctagtcccagccca
aataccttctcttacgactcctctggaaatcctgttctcctccagccctttggcccctcg
ttcttcttctcctcctcttcctcttcccccgcccccgctagcttagacctcaggaaccct
gctgaccttgcagatctcctcggccctgacctttttgtctcccgctctggacctggcggc
cccactagtgctactagcgcggttcccttcaatccgatgatcttccttcaggattacctc
cagcaattaatgtccggaggtgccaatatccaagtcgtagttgagggcggacctggcggc
ggtattgggaacctaggggattactttattggccctggccttgagcagcttatacaacag
ctcactgagaatgatcccaatcgttatggcaccccacctgctgccaagtctgttgttgca
aaccttccagacatcaaaattagcctagaattgcttgcctctgatgaagctcagtgctct
gtctgtatggatactttcgaaatgggaaacgaggccaagcagatgccatgcaagcatatc
tttcacaaaaactgcatcttgccatggctagagttgcataattcatgcccagtctgtcgc
tatgagcttcccactgatgatcttgactatgagcaacgcagggggacaccagcagtccct
tcaccacggacaactgctggaacaagggattctagtggtgttggggcagcagctggagcc
ttcactgaaggggattctggtagccctagaatgattgagagaaggtttaggatttcacta
ccatggccatttagaatgtttgaggcgcaagcagaaggtagcaatgctggtagtggagga
aatgacgggaacaacagcaccaatccacatcctgatcggcaagaagatggacgctaa
DBGET
integrated database retrieval system
