Zingiber officinale (ginger): 121971390
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Entry
121971390 CDS
T08725
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
121971390
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121971390
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GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
MMR_HSR1
RsgA_GTPase
AAA_28
AAA_22
AAA_16
AAA_15
Motif
Other DBs
NCBI-GeneID:
121971390
NCBI-ProteinID:
XP_042378574
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Position
4A:complement(136772462..136776560)
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AA seq
595 aa
AA seq
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MVSDASKKKAAAKKAAAAAKRGGKSAAASSKVSEVANGVSKVADGVGALQISDRTCTGVL
ASHPQSRDIHIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLASIGCRELP
IPEHMDIYHLSREIEASDMSSLEAVICCDEERLRLEKEVEILAAEDGGGGEALDLIYERL
EALDASTAEKRAAEILYGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPT
NHLDLEACVWLEETLKKFDRILVVVSHSQDFLNGVCTNIIHMQSKKLKLYSGNYDQYVQT
RSELEENQMKQYKWEQDQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLMEKVV
KDKVLVFRFTDVGKLPPPVLQFVGVTFGYTPETPLIYKNLDFGVDLDSRIALVGPNGAGK
STLLKLMTGDIAPTDGMVRRHNHLRIAQFHQHLAEKLDLDMPALQYMMKEYPGNEEERMR
AAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAWRLPHLLLLDEPTNHLDIETIDSLAE
ALNEWDGGLVLVSHDFRLINQVAKEIWVCENQAATRWEGDIMEFKQHLKSKTEFN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgacgcgagcaagaagaaggcggcggccaagaaggctgcagcggcggcgaag
aggggagggaagtctgcggcggcctcatcgaaggtgtccgaggtggccaacggggtttcg
aaggtcgccgatggagttggggcgctccagatctcggatcgcacgtgtactggagtgctt
gcttcgcatccccaatccagagatatccatattgaatccttgtcattaacttttcatggg
catgatctgattgtagattctgagttggaactcaactatggaaggcgctatggtttgcta
ggactgaatggttgtgggaagtcgactcttcttgcatctattggatgcagggagctccct
attcctgagcatatggatatataccacctttcgagggaaattgaagcttcagacatgtcc
tcattggaggctgtgatttgctgtgatgaagaaagattgaggttggagaaagaagttgaa
atactggctgctgaggacggcggtggaggagaagctttggatctcatctatgagcgattg
gaagctcttgatgcatcaactgctgagaagcgtgctgctgagattctgtatggtcttgga
tttaataaacaaatgcaagcaaagaaaacccgagatttctctggtggctggcgcatgcgg
attgcattagctagggcactctttatgaatccaacaatacttttgcttgacgaaccgaca
aatcatcttgacctggaagcatgcgtttggttagaagagactttaaagaagtttgatcga
atcctcgttgtggtgtcgcattctcaggattttctcaatggagtctgcaccaacatcata
cacatgcaaagcaagaagcttaagctgtactccggtaactacgatcagtatgtccaaact
cgctctgagctggaagaaaatcagatgaagcagtacaaatgggagcaggatcagatttca
tcgatgaaagagtacattgctcgctttggacatggttccgcgaaattggctcgccaagct
cagagcaaggagaaaaccctagctaagatggagcgcggtgggcttatggagaaagtggtg
aaggacaaagtgttggtctttcgcttcacagatgtcggcaaactccccccacctgtccta
cagtttgtcggcgtgactttcggctacactccggagacccccctcatctacaagaacctt
gattttggggtggatctagattcaagaattgctctggtagggcctaatggtgctggcaag
agcacattgctgaagctaatgactggggatatcgctcctacagatggaatggtgcgacgg
cacaatcatctcaggatcgcacagtttcaccagcatctggctgaaaaactggatctagat
atgccggcactccagtacatgatgaaggagtacccaggcaatgaggaagagcggatgagg
gccgccataggtaagtttggactgtcagggaaagcacaggtgatgcccatgaaaaacttg
tcggacggtcagaggagcagggtgatctttgcctggctggcctggaggctacctcatctg
ctgctcctggatgaacccacaaaccacctggatatcgagactatcgattcgctagcggag
gctctgaatgagtgggacgggggtctggttctggtgagtcacgatttcagattgatcaac
caggtggccaaggagatctgggtctgcgagaatcaagctgccaccaggtgggagggcgac
atcatggaattcaagcagcacttgaagagcaagaccgagttcaactga
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