Zingiber officinale (ginger): 121971401
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Entry
121971401 CDS
T08725
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
121971401
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121971401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Motif
Other DBs
NCBI-GeneID:
121971401
NCBI-ProteinID:
XP_042378587
LinkDB
All DBs
Position
4A:137270474..137288669
Genome browser
AA seq
500 aa
AA seq
DB search
MNGSFNGQILVDKLTRLNNSQQSIETLSHWCIFHRYKAKQVVETWEQQFYSSPREQRVSF
LYLANDILQNSRRKGLEFINEFWKVLPDALSDVFANGDDIGRKTVQRLVNIWEERKVFGS
RGQILKEEILGRKLEDKNKNGKAITQNLNQSSGILEKIISSYDKLSDEDSLFGKCQAALN
IIDKVEKELGSDFEIGSANGSEIIGNLQIQHGILGECIEQLKASELSRATLISYLREALN
EQELKAEQTGHQLQVAELRCKQAGNILSQLNVEQQPPATQNPTEPLRFAPEVTASSAVDA
QITLSRCTQEEPLPDMKPSLSDENRKTEAAAVAAKLTASASSAQMLSFVLSSLASEGVIG
PANREESPDSKRLKLQNSLPPPHPLLQVPMPPPFSHPEAMHQLPPPQSSSPNLEPTSTSV
SLATPSPSTSVQFMQSAAGPMTGVPYAYGSAPPPLPNYPMFGMHPNLSSPNPFYSFQPPE
GPNLVVQPPLPSGPPPLTRQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaatggatcattcaatgggcagattttggtggataagcttaccagacttaacaattca
cagcagagtatagagaccttatcacattggtgcatcttccatcggtacaaagctaagcaa
gttgttgaaacctgggagcaacaattctattcctcccctagggaacaaagagtttccttc
ttgtatctggccaatgatattttgcagaacagtcggcgaaaaggtttagaattcattaat
gaattctggaaagtgcttcctgatgctttatctgatgtatttgctaatggagatgatatt
ggaaggaaaactgtgcaaagattggttaacatttgggaagagcggaaagtttttggttca
cggggacaaattctcaaggaagagatactgggaaggaagcttgaagataaaaataaaaat
ggaaaggcaattactcaaaacttgaaccaatctagtggaatactggaaaagattatttca
agctatgataaactttctgatgaagattctttatttggaaaatgtcaagctgctcttaac
atcattgataaagtagaaaaggaactgggaagtgattttgaaataggaagtgcaaatgga
tctgaaattattggtaacttacaaattcagcatggcattctaggagagtgcattgagcaa
ctgaaggcatctgaattgtctagagcaactctaatctcatatttaagagaggcacttaat
gagcaggaactaaaggctgaacaaactggccaccaactccaggtcgctgaattacgatgc
aagcaagcaggtaacatcttatcgcagctcaatgtggaacaacaacctccagccacacag
aacccgactgagccattacgctttgctcctgaagtgactgctagctctgctgttgatgct
caaatcacgctgagtagatgcacccaggaagaacccctccctgacatgaaaccttctctc
agcgacgagaacaggaaaacagaagctgctgcagttgcagcgaaactcacagcatctgct
tcttcagcccaaatgctgagcttcgtcctctcatctctggcctcggaaggcgtcattggc
ccggcaaatagagaagaatcccctgatagcaaaaggctaaagctacagaacagcctgccc
ccacctcaccctctccttcaagtgccgatgccaccgccattttcccatccagaagcaatg
catcagcttcctcctccgcaatcgtcatcccctaacctggagccgacatccacttcagtg
tcactcgcgacaccgtcaccgtcaacttctgtccaattcatgcaatctgctgcggggcct
atgacaggcgtcccttacgcgtatggctcagctccgccacctctaccaaactatccaatg
ttcggcatgcatcccaatctaagttctccaaacccattctacagctttcaaccacctgaa
ggccccaacctcgttgtgcaaccaccgttgccatcgggaccacctcccctgactcgacaa
taa
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