Zingiber officinale (ginger): 121971539
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Entry
121971539 CDS
T08725
Name
(RefSeq) CSC1-like protein RXW8
KO
K21989
calcium permeable stress-gated cation channel
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121971539
Transporters [BR:
zof02000
]
Other transporters
Pores ion channels [TC:
1
]
121971539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
RSN1_TM
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
121971539
NCBI-ProteinID:
XP_042378802
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All DBs
Position
1B:complement(109161361..109172888)
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AA seq
717 aa
AA seq
DB search
MNLSALLTSAGINIGLCTLYLSLYSILRKQPSFLYVYFGRQLTQRNNNYLDAFNLERFVP
SPSWIMKAWGLTEEEILSVGGLDAVVFLRIFVFSLRIFSIAAFVCVFGVLPINYFGQEMQ
HTRISAESLEVFTIANVKEGSRWLWVHCAALYVITCSACSLLYFEYKSISKMKLDYIIGS
PPKPSHFTVLVRGIPKSIGEPLGDTIRNFFLHYHGSSYLGHQIICRRGKLQNFFSNVKMV
YKKIFCFEVTALDNTCRSGLCRCGLCGGVSNSFRFYPDNFYERRTDLHCIDISSHQKECS
SAFVFFKTRYAAIVASKVLQTSNPMLWVTDLAPEPNDVYWRNLWIPYRQLWVRRIATLLA
SIVFMFLFLIPVTFVQGLTQLEQMRHMLSFLKGIPNKAFVIQFVSGYLPSVILQLFLYTV
PPTMMLFSTLEGPVSRSVRKKSALCKVLYFTIWNIFFVNVLSGSLITQLSLITRPKDIPA
HLAKDVPRQATFFMTYVLALGWTSLSSEVLQSYSLLYHLTRKYIFRCKDDPSLVPSFPYH
TEVPKVLLFGLLGFTCSILAPLILPFLLVYFFLGYLVYRNQILNVYSTSYDSGGRMWPIV
HNTTVFSLVLTQIIALGVFGIKASQMASAFTIPLLIITLLFSEYCKKHFYPIFRDLSAQD
FIDMDRDDEQCGRMPKIHEQLFTAYAWLAPPPPPPITGALELCYVDGEPDSPVQVTI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctctgccctcctgacatctgcaggcataaacattggtctttgtacactttac
ctgtcactatattcaatcttgagaaaacaacctagttttctctatgtgtactttggccgg
cagctcacacagcgaaataataattatctggatgctttcaatttggaaagatttgtgcca
tctcctagctggataatgaaagcttggggactaacagaagaagaaatcctctctgtcggt
ggcctggatgctgtggtattccttagaatttttgttttcagcttgcgtatcttctccatt
gctgcttttgtttgtgtctttggagtgcttcccattaattattttggccaagaaatgcag
cacacacgaatatctgcagaatcattagaagtatttacaattgcaaatgtcaaagaagga
tcccgctggctttgggtccactgtgccgctttatatgttataacctgttcagcttgtagt
cttctttacttcgagtataaaagtatttcaaaaatgaaactagattatatcattggatca
cctccaaagcctagtcattttacagtccttgttcgtggtattccaaagtcaataggggaa
cctttgggtgatactattagaaacttcttcctacactatcatggttcaagttacttagga
catcaaataatttgtcgaaggggaaaactgcagaattttttttctaatgtgaagatggtt
tacaaaaagattttctgctttgaagtcactgctctggataatacttgcagatctggcctc
tgtagatgtggtctttgtggaggagtgtccaattcgtttcgcttttaccctgataatttt
tatgaaaggaggactgacttgcactgcatagatataagtagccaccaaaaggaatgctca
tctgcgtttgtctttttcaagactcgttatgcagcaattgttgcttcaaaggttctgcag
acttcaaatcccatgttatgggtaacagaccttgctcctgaaccaaatgatgtttattgg
cgaaacttatggataccatatcggcagctttgggttcgaagaatagcaactcttttggct
agcattgtcttcatgtttttgtttcttatcccagtgacttttgtacaaggtctaactcaa
ctagagcagatgcgacacatgctatcatttctaaaaggtatacctaacaaggcctttgta
atccagttcgtgtcaggttacctccccagtgtcattttgcagcttttcctatatactgta
cccccaacgatgatgctgttttctaccttggaagggcctgtttcacgcagcgtcagaaag
aaaagtgcattgtgcaaagtattgtacttcactatatggaacatattttttgtgaatgtt
ttatctggatctctcatcacccagctgagtctcattactagaccgaaagatattccagct
catcttgctaaagatgtgccaaggcaggcaaccttcttcatgacttatgtccttgcatta
ggttggacaagtttatcatctgaagtactgcaaagttactcactattatatcatctgacc
cggaagtatatattcagatgcaaggatgatccaagtttagtaccctcatttccatatcac
actgaagttccaaaagtcctcttgttcggtttactcggcttcacatgttcgatattggca
cctcttatattaccattcttactggtttacttttttctcggttatctggtgtatcgcaac
cagattctaaacgtttacagcacaagttatgattccggcgggcggatgtggcccattgtg
cacaacactacagtgttctctttggtgcttacacagatcatagcacttggagtttttgga
ataaaagcatcccagatggcttcagcgttcactattccacttctgatcatcacacttctt
ttcagtgaatactgcaagaaacacttctatcccatattcagagatctctctgctcaggac
ttcattgacatggatagagacgatgagcagtgtgggaggatgccgaaaatccacgagcaa
ttattcacagcatatgcatggcttgcgccgccgccaccaccaccgatcaccggtgctctc
gagttatgttatgttgatggggaacctgactcccccgtgcaggtcacaatctga
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