Zingiber officinale (ginger): 121971542
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Entry
121971542 CDS
T08725
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121971542
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121971542
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
121971542
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121971542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EZ
HEAT_2
HEAT_EF3_N
HEAT
TOR1L1_N
HEAT_ECM29
Adaptin_N
HEAT_DAAF5
CEP104-like_TOG
GNC1_N
Cnd1
mTOR_dom
Htt_N-HEAT_1
PPP2R1A-like_HEAT
RIX1
Sporozoite_P67
Motif
Other DBs
NCBI-GeneID:
121971542
NCBI-ProteinID:
XP_042378801
LinkDB
All DBs
Position
4A:143300616..143342507
Genome browser
AA seq
1222 aa
AA seq
DB search
MANINITNILEKMTGKDKDYRYMATSDLLSELNKEGFKADSDLELKLTSAVLQQLEDAAG
DVSGLAVKCLAPLVKKVSEERIMEMANKLCDKLLNGKDQYRDIASIALKMIIAEVNTPSL
AQRILVSLGPELTKGITNPGKGNEIKCECLDILGDTLQKFGNLMTKDAHEELLIALLSQL
GSNQASVRKKSILCIASLASSLPDDLLAKATSEVVRLLTSKNMKPEFTRTNIQMIGALSR
SVGYRFGPHLGESVPLLINYCKSASESDEELREYSLQALESFLLRCPRDISPYCDNILNL
TLEYLSYDPNFTDNMEEDTDEEGNEEEEDDESENEYTDDEDASWKVRRAAAKCLQAIIVS
RPEMLTMLYAEACPKLIERFKEREENVKMDVFNTFIELLHQTGNVSKGQVDINESGPRWL
LNQEVPKIVKSINRQLREKSIKTKVGAFSVLKELVLVLPNCLAEHISALVSGIEKALTDK
SSTSNLKIEALVFTRLVMASHSPSVFHPYIKALSSPVLSAVGERYYKVTAEALRVCGELV
RVLRPNFETSMPDFRPYVSPIYSAILARLANQDQDQEVKECAISCMSLVISTFGDNLQKD
LPACLPILVDRMGNEITRLTAVKAFAVIANSPLRINLSCVLEQVVSELTGFLRKANRALR
QATLGTLNSLVVAYGEQISSTTYEVIIVELSTLISEADLHMTALALELCCTMMMAKISSQ
SVGVTVSHKVLPQALILIRSSLLQGQALQALQRFFASLVHSANTSFDSLLDSLLSSAKPS
PQSGGLAKQALHSVAQCVAVLCLAAGDQKCASTVDMLKGILKDDSNMNSAKQHLALLCLG
EIGRRKDLSVHVHIENIVIESFQSPFEEIKSAASYALGNIAVGNLSKYLPFILDQIDNQQ
KKQYLLLHSLKEVIARQSIDQPGKSELQESNVEKILSLLFNHCESDEEGVRNVVAECLGK
IALIEPKKLVPALKERTASSTAFTRATVVIAIKYAIVERPEKIDEILYPEISTFLMLIKD
SDRHVRRAAVLALSTAAHNKPNLIKGLLPELLPLLYDQTVIKKEMIRTVDLGPFKHIVDD
GLELRKAAFECVDTLLDSCLDQMNPSTFIVPYLISGLSDHYDVKMPCHLILSKLADKCPA
AVLAVLDSLVDPLEKTISHKPKADAVKQEVDRNEDMIRSAFRAIASISRISGGEYSLKFK
MLINNILNTAALAEKYNFVRCE
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacattaatataacaaatattttggagaagatgacaggcaaggataaggattat
agatatatggcaacttcagatctgcttagcgaactgaacaaggaaggttttaaagctgat
tctgatctggaattgaaattaacaagtgctgttctccaacagcttgaagatgcagctgga
gatgtttctggactagcagtgaaatgcttagctcctcttgtcaagaaggtcagtgaggag
agaattatggaaatggcgaataagctctgtgacaaattgctgaatgggaaagatcaatat
cgtgatattgctagtatagccttgaagatgataattgctgaagttaacacaccatctctt
gcgcaacgtatacttgtttcacttggccctgaattgacaaagggcataactaatcctggg
aagggtaatgaaataaagtgtgaatgccttgacatattaggtgacactctccaaaaattt
ggaaacttgatgacaaaggatgctcatgaggaattgctgattgcccttctttctcagttg
ggttccaatcaagccagcgtcagaaagaaatcaattctttgtattgcatcacttgcctca
agtctaccggatgatctactggcaaaggcaacatctgaagttgttcgattgttgacaagc
aagaacatgaaacctgaatttactaggacaaacattcaaatgattggagccttaagtcga
tctgttggatatcgttttgggccacaccttggtgagtctgttccattgcttatcaattac
tgcaagagtgcatcagaatctgatgaagaacttcgtgaatacagcttgcaggcattggag
agttttctgcttagatgtccaagggacatatctccttactgtgataatattttaaatcta
actttggagtatttaagctatgaccccaactttactgataacatggaggaggacactgat
gaagaagggaatgaggaggaggaagatgatgaaagtgaaaatgagtatactgatgacgag
gatgcaagctggaaagttcgaagagcagctgccaaatgcttgcaggcaattattgtatca
cggccggagatgcttacaatgttgtatgcagaggcatgccccaagctgattgaaagattc
aaagaaagagaagagaatgtcaagatggacgtatttaatacatttatcgagttgctgcac
cagactggtaatgtgtcaaagggacaggtcgacattaatgagtcaggtccacgatggttg
ttgaatcaagaagtgccaaaaattgtgaaatcgatcaatagacaactccgtgaaaaatct
attaaaacaaaggttggagcattctcagtgttgaaagaacttgtgcttgtcttacctaat
tgtcttgctgagcatatcagtgcccttgtttcagggattgaaaaggctttaactgacaaa
tcttccacttcaaacttaaagatagaggcccttgttttcaccagattggttatggcttca
cattcaccatctgtatttcatccgtacatcaaggctctctctagtcctgttctatctgct
gttggtgaaagatactataaagtaactgctgaagcattaagggtttgcggagaattagtt
cgtgtacttcgccctaattttgagacttccatgccagacttcagaccatatgttagccct
atctatagtgccatattggctcgcttggcaaatcaagatcaagatcaggaggttaaagaa
tgtgcaatatcttgcatgagccttgtgatatcaacttttggtgacaaccttcaaaaggat
ctaccagcttgccttcccatactagttgataggatgggaaatgagatcaccaggctaaca
gctgtgaaggcatttgctgtaattgcgaactcgcctctgcgcataaacctctcatgtgtt
ttggaacaagttgtttctgaactgacgggattcctgcggaaggctaacagagccttgaga
caggcaacattgggcacactcaactccctagtagttgcatatggcgagcaaattagctca
acaacttatgaagttataatagtggaactttcaacacttataagtgaggcagacttacat
atgactgcacttgctctggaactttgctgcacgatgatgatggccaaaatatctagtcaa
agtgttggtgtgactgttagtcataaagttcttcctcaagctcttatactaatcaggagc
tcgctgttgcagggtcaagctttgcaagcattacagagattctttgcttccttggttcat
tcagcaaatacaagctttgattcactattagattccctcctttcaagtgctaagccttca
ccacagtctggtggtcttgctaaacaggctcttcattctgttgcacagtgtgttgctgta
ctttgcttagcagctggtgatcagaaatgtgcatccactgtagacatgctgaaaggaatt
ctgaaagatgatagcaatatgaattctgctaaacaacacctggcattgctatgtctggga
gaaattggaagaaggaaggatctaagcgtacatgtgcacattgagaatattgttattgag
tcattccagtctccttttgaagagataaaatctgcagcttcatatgctcttggaaacatt
gctgtgggcaatctatctaaatatcttccatttatcttggatcaaattgacaatcaacaa
aaaaaacaataccttttgcttcattctttgaaagaggttattgctagacaatctattgat
cagcctggcaaaagtgagttacaggagtctaatgttgagaagatattgagcttactcttc
aatcattgtgaaagtgatgaagaaggggttcgcaatgttgttgctgagtgtttgggcaaa
attgcgcttattgaacctaaaaagctcgtacctgcactaaaggaacggactgctagttct
actgcattcacaagagcgacagttgttattgctattaaatatgctattgttgaaagacct
gaaaagatagatgaaattttgtatccagagatctccacattcttgatgctcattaaagac
agtgatagacatgttcgtcgtgcagctgttctggctttgagtacagctgctcataacaaa
ccaaacctgattaaaggacttcttcctgagttattaccgctgctctatgatcagactgtc
attaagaaagaaatgataagaacagttgatcttggtcctttcaagcacattgtagatgat
ggtcttgagcttcgaaaagcagcttttgagtgtgtggacaccttgttggacagttgtcta
gatcaaatgaatccctctacatttatagttccttacctgatttctggattaagtgatcat
tatgatgtgaagatgccatgccatcttatcctctcaaaacttgcagataaatgccctgct
gctgttcttgcagttctggactcacttgttgatcctcttgaaaagaccatcagtcacaag
ccaaaggcagatgcagtgaagcaagaagtagaccgtaatgaagatatgattcgaagtgct
tttcgagctattgcttccataagccgcataagcggaggtgaatacagtttgaagttcaag
atgctgatcaataatattttgaacaccgccgcacttgctgaaaagtacaattttgtgcgc
tgtgagtga
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