Zingiber officinale (ginger): 121971600
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Entry
121971600 CDS
T08725
Name
(RefSeq) 26S proteasome regulatory subunit 6A homolog
KO
K03065
26S proteasome regulatory subunit T5
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121971600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zof03051
]
121971600
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121971600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
nSTAND3
AAA_5
AAA_16
RuvB_N
AAA_2
AAA_22
DUF815
AAA_14
AAA_7
TIP49
PhoH
Mg_chelatase
AAA_lid_PRS2_C
ATPase
IstB_IS21
AAA_24
AAA_33
LMNTD2_N
Parvo_NS1
RNA_helicase
AAA_11
AAA_28
AAA_25
Sigma54_activat
AAA_3
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
121971600
NCBI-ProteinID:
XP_042378869
LinkDB
All DBs
Position
4A:complement(146922167..146953613)
Genome browser
AA seq
423 aa
AA seq
DB search
MATATVEDAAFEDDQISSMTTEDIIRASRLLDNEIRILKDEMQRTNLELESFKEKIKENQ
EKIKLNKQLPYLVGNIVEILEMNPEEEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
ELVEAIVLPMTHKDRFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
VQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH
PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKKSSLN
YYA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcgacggtggaggatgcggcgttcgaggacgatcagatctcttccatgacc
accgaagacatcatcagggcctcacgcctcctcgataacgagatccgcatcctcaaggat
gagatgcagaggacgaatctcgaactcgagtccttcaaggaaaaaatcaaggagaaccaa
gagaaaattaagctcaacaagcagttgccttacctagttggaaacatcgttgagattttg
gagatgaatccagaagaagaggcagaggaagatggtgcaaatattgatcttgattctcaa
agaaagggaaaatgtgttgtattaaaaacttccacccgacaaacaatttttctccctgtt
gttgggttagttgatcctgataagttaaagcctggtgatcttgttggggtcaataaagat
agttacttgatcttggacactcttccttcagaatatgactcacgagtgaaggcaatggaa
gttgacgaaaaaccaacagaagattataatgatataggtggtcttgagaaacagattcaa
gaacttgttgaagctattgttctgccaatgacacacaaagaccgtttcgagaaattagga
attcgccctcctaaaggagtgcttctatacggaccacctggaactggtaagacattgatg
gcacgagcttgtgccgcacaaacaaatgcaactttcttgaaactggcaggtcctcaactg
gttcagatgtttattggtgatggagcaaagcttgtccgagatgcttttcagctagcaaaa
gagaaagctccatgtataatttttattgatgagatagatgctatcggaaccaaacgtttt
gacagtgaagtaagtggagacagggaggttcaaagaactatgctggaattattaaatcag
cttgatggctttagcagtgatgaacgtataaaggtgatagctgcaactaatcgtgctgac
attcttgatcctgctcttatgcgttctgggcgtctggatcgtaaaatagaatttccccat
ccaactgaagaggcaagagctagaatattgcagatccattcgaggaaaatgaatgtgcac
cctgatgtgaactttgaagagctggcaagatcaaccgatgattttaatggagcacaactt
aaagcggtttgtgttgaagctggcatgctcgccttgcgtcgtgatgcaactgaggtgacg
catgaagatttcaatgaagggataattcaagttcaagcaaagaagaaatccagcttaaat
tattacgcttag
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integrated database retrieval system
