Zingiber officinale (ginger): 121971627
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Entry
121971627 CDS
T08725
Name
(RefSeq) long chain base biosynthesis protein 2a-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00600
Sphingolipid metabolism
zof01100
Metabolic pathways
zof04382
Cornified envelope formation
Module
zof_M00094
Ceramide biosynthesis
zof_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121971627
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121971627
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
121971627
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
121971627
Amino acid related enzymes [BR:
zof01007
]
Aminotransferase (transaminase)
Class II
121971627
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
COA2
Motif
Other DBs
NCBI-GeneID:
121971627
NCBI-ProteinID:
XP_042378910
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All DBs
Position
4A:148647828..148652213
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AA seq
489 aa
AA seq
DB search
MVRLPYSTALTTLFSYGLLFAFGQLRDLFRKIIDWFKSSSEDLKGYAPICLGLEDFYTRR
LYLRIQDCFCRPIASAPDAWFDVVERYSEDSNKTLHRTSKTSKCLNLGSYNYLGFAAADE
YCTPRVIESLKKYSPSTCSIRVDGGTTDLHTELEELVARFVGKPAAVTFGMGYATNSSII
PALIGKGGLIISDSLNHNSIVNGARGSGAAIRVFQHNNVAHLEKVLREQIAEGQPRTHRP
WKKIIIIVEGIYSMEGELCPLAEVIAVCKKYKAYIYLDEAHSIGAVGKSGKGVCELLGVD
PADVDIMMGTFTKSFGSCGGYIAASKEVVQYLKDTCPAHVYATSMSPPAVQQVISSLKVI
LGEDGSSRGSQKLAQIRENSNFFRCELKKMGFEVLGDNDSPIMPIMLYNPAKIPAFSREC
LKQNVAVVMVAFPASPLLLARTRICISAAHSREDLLKGLEVISKVGDLVGIKYFPTEPPK
HETKVYKVE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggttgccctactcgaccgcactcacgacgctgttcagctatggcctcctcttc
gcgttcgggcagctcagggatttgttccggaagataatcgattggttcaaatccagctcc
gaggacctcaaggggtatgcgccgatctgcttagggctggaagacttctatacccggcgc
ctctatctgcgcattcaggattgcttttgtcgaccaattgcaagtgcaccagatgcttgg
tttgatgtggtggaacggtactccgaggacagtaacaagaccttacatcggacctcgaag
acttccaagtgccttaatctgggatcatacaactaccttggttttgcagcggctgatgaa
tactgcacacctcgtgtaattgaatctttaaagaagtattctcccagcacctgcagtatc
cgtgttgatggaggaacaactgacttgcatactgagctggaggagctagttgcaaggttt
gttggaaaaccagctgctgtaactttcggcatgggttatgctacaaactcttccattatt
cctgctttgattgggaagggaggactcatcattagtgattctttgaatcataactcaatt
gtaaatggtgctcgaggatcaggtgcagcaatacgtgttttccaacacaataatgtggcg
cacttggaaaaggtcctgagagaacagatagctgagggacaacctcgaactcacaggcca
tggaagaagattatcatcattgtcgaaggcatatacagcatggaaggagaactttgcccg
cttgctgaggttatagctgtttgcaagaaatataaggcatacatctacttggacgaggct
catagcattggtgctgttgggaaatctggcaaaggagtctgtgagctcctaggagtggat
ccagctgatgttgacatcatgatgggcacatttacaaaatcatttggatcctgtggagga
tacattgcagcatccaaggaagttgtccaatacctaaaggacacttgtccagcacatgtt
tatgcaacttccatgtctccacctgctgtgcagcaagttatatcatcacttaaagtcatt
ctcggagaagatggatcaagtagagggtcccagaaacttgcacagattcgtgaaaatagt
aatttcttccgatgtgaacttaagaagatgggatttgaagtcctcggtgacaatgactct
ccgattatgccaataatgctttataacccagcaaagattccagccttttctagggaatgt
ctcaagcaaaatgttgctgttgtcatggttgcatttcctgcctcacctcttcttcttgct
aggactcgaatttgtatatcagctgcacactctagggaagatctgcttaaagggctggag
gttatcagcaaagttggtgatctagtggggatcaagtacttccccaccgaaccaccaaag
catgagaccaaggtatacaaggtggagtag
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