Zingiber officinale (ginger): 121971669
Help
Entry
121971669 CDS
T08725
Name
(RefSeq) WASH complex subunit 5-like isoform X1
KO
K18464
WASH complex subunit strumpellin
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121971669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121971669
Membrane trafficking [BR:
zof04131
]
Protein recycling
Others
WASH complex
121971669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
DnaA_N-like_STI
GIT_CC
Motif
Other DBs
NCBI-GeneID:
121971669
NCBI-ProteinID:
XP_042378974
LinkDB
All DBs
Position
4A:complement(150436533..150505874)
Genome browser
AA seq
1178 aa
AA seq
DB search
MASSSDSSQPNRGDGDGDGDGSSPLHPELLQFCSRAQTLISELFLLSDRIPSEFLDRRFD
PVLFDLRYLDSPGAFESRIEGNAALEALEDQVRESCSEFLKRFFLLANGAVLYYLELLRY
LDSMQEGLSLQCTLDSVLDDECSRQLLTESIQLFGCFLLLVEHRIGGLLREKLLVTHLRF
SRCFNSPNIKHICSFCRMHRAASDMKYDVNPFSLRSTTIYIENPEDILARFPFPKLVVDA
IICALRNADLYDQIRHYPDPQHRSMALSLQSRCMYVLLFYSPEFLHDGFIMREIVDRFFK
DHWVVPLFLHHAVDLFVSWDAFKEAKSSLSSCHSPTLVRDCCQNHCKKVRHLSSEIELIL
SNGVLTKDYVLDRFQNLFSLVRDCNVALRWLLLHRICIDRKLREIVTSVGIAEQVDEDCL
LAFLLRTSQLEFQLKQLFVELLENKESFWHEKKHCVSRCIEELSGYLSRSWASSCKIKNE
NLKDWFEKLSVEVYSLDHKQPGISGRIVYRIISALKDILKLHQVRSLSPLMIEENLQVKK
SLLEMEKHLQDMIKANSLSNDSLLTFSVITDATYAWGYVSRLGGLLGRMIEGDPSVMRIL
HMFFLKFKKWMDVPLSRIAQSQSADLQCTSNYYFSQFAAQICSTLDIVPGLLLGLFKEDG
IHDRSFYLANRVDKEKLQEFMQMDLLLKSGRAANKICVISQGIMVISRNFLGLINMDLKD
WLVEQIIKGLKMQIQNKLNSFFLSSSVSRGTLEIDMRMLSTYIQSQMQMMEILQDLLHIN
GRSIWEEVLANFLKESARNFLQEHSELIKQKRDVEFSSALLNSISKSKTFFGNLLIQVLQ
LTDPSRSMFIEPMSGWFDAEGNELLGLLFFDVLDSCIGQAGLCILDSLLCILVKNSLEHA
LSCLNSRLDCRILEELRKMDGNLGPAPSLPLLGWTSYKSMIKMGNESMDPLVSCFATTGQ
LQLLRCFVAFKLRSSSKIKVGSIYSAVEGLNASIYVNRDKTIEALFSKQENTDQKMEDNP
FVGLLQALNRMQKFCGILSPLQTNYILKEPPTLVARSASILSISQLSRYVLDTHLGTLTS
KTNKSITDFSPVVIGLGTFLKQFHPSHATQYIQYMGQYVRITAELAYGVYDPQILLDDPA
SEVLKSAFWLMYFCRFMGAPKSLVDSCLPPSLVAMLQM
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcatccgattcgtcccagcccaatagaggcgacggcgacggcgatggcgat
ggaagcagtcccttacacccagagctgctccagttctgcagtagagctcaaactctgatt
tccgagctcttccttctctcggatcgaataccctccgagttcctcgatcgtcgcttcgat
cccgtccttttcgatctcaggtacttggactctcctggtgcattcgagtcaaggattgag
ggaaatgctgcactagaagcactcgaagaccaagttcgtgaatcctgttcagaattcttg
aaaaggttctttcttttggcaaatggcgcggtcctgtattatttggagctccttaggtac
ctggattccatgcaggaagggttatctttgcagtgtactctagatagtgtgctcgatgat
gaatgtagcagacagctattaacagaatccatacaactctttggatgctttctactattg
gtggaacaccgaattggtggtttattaagggagaaacttctggtcactcatttacgcttc
agtcgctgcttcaattctcctaacataaagcacatatgctcattttgccgtatgcatcga
gctgcttctgacatgaagtatgatgttaatccattttctttaaggtcaacaacgatttac
atagagaatcctgaagatattttggcaagatttccttttcctaagttagtggttgatgct
atcatctgtgctctacggaatgctgacctatacgatcaaatacgccactatccggatcca
caacatcgttcgatggcactgtcattgcagagcagatgcatgtatgttctactgttttat
tcacctgagtttttgcatgatggttttatcatgcgagaaattgttgatcggtttttcaaa
gaccattgggtggttcctttgtttttgcaccacgcggtggatctgtttgtttcatgggat
gcctttaaagaagcaaagtcatcattatcctcttgtcattctcccacattagtacgtgac
tgctgccaaaatcactgtaagaaggttagacacctatcatctgagatagagttgattctc
tctaatggggttttgaccaaagattacgtgttggatagatttcagaacctattttcactg
gtcagagactgcaatgttgctttgcgctggcttttgcttcatagaatttgcattgatagg
aaattaagggagatcgttacttctgtagggattgcagaacaagttgatgaagactgcctg
ttagcgtttctattgaggacctcccaacttgaatttcagttgaaacaactatttgtagag
cttttggaaaacaaggaatctttttggcatgaaaagaaacattgtgtttctagatgcatt
gaagaactatctggctacctgtccagatcttgggcttcatcctgcaagattaagaatgag
aacttgaaggattggttcgaaaagctgtctgtggaggtttactcattggaccataaacaa
cctggaatttcaggcaggatagtttatcgtattatatctgcattaaaggacattttgaag
ttgcaccaagtgagatctttgtcaccattgatgattgaagaaaacctacaagtaaagaaa
tctttattggagatggaaaaacatctgcaagatatgatcaaagctaacagtttaagcaat
gattctctcttgacattttctgtgattacagatgccacatatgcatgggggtatgtttca
aggttaggtggacttcttggcaggatgattgagggagatccttcagttatgcgaattttg
cacatgttcttccttaaatttaagaaatggatggatgtgccactttcacgcattgcccag
agtcaaagtgcagatctccagtgcacctcaaattattatttctcacaatttgcagctcag
atatgttcgacattagatattgtacctggtttactgcttggattatttaaggaagatgga
atacatgatcggtctttttatttagcaaaccgagtggacaaagagaagcttcaagaattt
atgcagatggatcttctgctaaagtcaggaagggctgccaacaagatatgtgtcatctca
cagggaataatggttatctcgaggaatttccttggccttatcaacatggacctcaaagac
tggttagtggagcagataataaaaggactgaagatgcaaattcaaaataaactgaattct
tttttcctctcatctagtgtttctcgtggaactctagaaatcgatatgaggatgctatcc
acttatattcaatcacaaatgcagatgatggagatccttcaggatttacttcatataaat
gggagatccatttgggaagaagttttagccaatttcttgaaagaatctgctcggaatttt
ttacaggaacacagtgaacttataaaacagaagagagatgtggaattttcatctgcttta
ttgaatagtatttctaagtcaaagaccttttttggaaatttgttgatccaagtactgcag
ttaactgatccatctcgttcaatgttcatagagcctatgagtggttggtttgatgctgaa
gggaatgaattactggggttgcttttctttgatgtacttgattcatgtatagggcaggct
ggtttgtgcatcttggattcactactatgtatattggtcaaaaacagtttggagcatgca
ttgagttgtcttaacagtaggttggattgtagaattttggaagaactacgtaaaatggat
ggtaatttgggtcctgcaccatctctacctttgctaggttggacgtcgtataagagcatg
atcaagatgggcaatgaatcaatggatccactagtttcatgttttgcaactactggacag
ctacagttgttgcggtgctttgttgcctttaaacttcggtcatcatctaagattaaggta
ggttctatttattcggctgttgaaggtctgaatgcctcaatttacgtcaatagggataaa
acaattgaggcattattttccaaacaagaaaacacagatcaaaaaatggaggataatcca
tttgtgggacttcttcaagcactcaacagaatgcagaagttttgtggtattctttctcct
cttcaaacaaattatattctgaaagagcctcctactttagttgcaagatctgcatccatt
ttgtcaatatcacagttgtcacgttatgtacttgatactcacttgggcactttgaccagt
aaaacgaacaaatccatcacagatttttctcctgtcgtcataggacttggaacatttctt
aagcagttccatccttctcatgcaacccaatatatacagtacatgggtcagtatgttagg
ataactgcagaattagcatatggagtctatgatccccagatattgcttgatgacccagca
tctgaggttttgaagtcagcattctggttgatgtatttctgtagattcatgggtgccccc
aaaagtttagttgactcatgcctgccgccctctcttgtggctatgttacaaatgtga
DBGET
integrated database retrieval system
